Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DHX40Q8IX18 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
DHX40Q8IX18 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
DHX40Q8IX18 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
DHX40Q8IX18 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
DHX40Q8IX18 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.16■■□□□ 1.14
DHX40Q8IX18 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
DHX40Q8IX18 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
DHX40Q8IX18 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DHX40Q8IX18 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DHX40Q8IX18 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
DHX40Q8IX18 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DHX40Q8IX18 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
DHX40Q8IX18 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.15■■□□□ 1.14
DHX40Q8IX18 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.15■■□□□ 1.14
DHX40Q8IX18 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
DHX40Q8IX18 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DHX40Q8IX18 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.15■■□□□ 1.14
DHX40Q8IX18 KRT18P14-201ENST00000534205 1250 ntBASIC22.15■■□□□ 1.14
DHX40Q8IX18 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
DHX40Q8IX18 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
DHX40Q8IX18 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
DHX40Q8IX18 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
DHX40Q8IX18 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
DHX40Q8IX18 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
DHX40Q8IX18 AL032819.2-201ENST00000624543 2162 ntBASIC22.15■■□□□ 1.14
DHX40Q8IX18 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
DHX40Q8IX18 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.14■■□□□ 1.14
DHX40Q8IX18 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.14■■□□□ 1.14
DHX40Q8IX18 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
DHX40Q8IX18 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.14■■□□□ 1.14
DHX40Q8IX18 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.14■■□□□ 1.14
DHX40Q8IX18 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.14■■□□□ 1.14
DHX40Q8IX18 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
DHX40Q8IX18 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
DHX40Q8IX18 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
DHX40Q8IX18 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
DHX40Q8IX18 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
DHX40Q8IX18 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
DHX40Q8IX18 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
DHX40Q8IX18 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
DHX40Q8IX18 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.14■■□□□ 1.13
DHX40Q8IX18 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.14■■□□□ 1.13
DHX40Q8IX18 KRT18P61-201ENST00000585825 1298 ntBASIC22.14■■□□□ 1.13
DHX40Q8IX18 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
DHX40Q8IX18 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
DHX40Q8IX18 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
DHX40Q8IX18 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
DHX40Q8IX18 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
DHX40Q8IX18 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC22.14■■□□□ 1.13
DHX40Q8IX18 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC22.14■■□□□ 1.13
DHX40Q8IX18 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
DHX40Q8IX18 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
DHX40Q8IX18 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC22.13■■□□□ 1.13
DHX40Q8IX18 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
DHX40Q8IX18 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
DHX40Q8IX18 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DHX40Q8IX18 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.13■■□□□ 1.13
DHX40Q8IX18 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DHX40Q8IX18 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.13■■□□□ 1.13
DHX40Q8IX18 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.13■■□□□ 1.13
DHX40Q8IX18 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.13■■□□□ 1.13
DHX40Q8IX18 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.13■■□□□ 1.13
DHX40Q8IX18 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DHX40Q8IX18 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.13■■□□□ 1.13
DHX40Q8IX18 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DHX40Q8IX18 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
DHX40Q8IX18 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
DHX40Q8IX18 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
DHX40Q8IX18 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
DHX40Q8IX18 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DHX40Q8IX18 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DHX40Q8IX18 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DHX40Q8IX18 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DHX40Q8IX18 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
DHX40Q8IX18 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
DHX40Q8IX18 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
DHX40Q8IX18 CYP21A1P-202ENST00000354927 1481 ntBASIC22.12■■□□□ 1.13
DHX40Q8IX18 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
DHX40Q8IX18 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DHX40Q8IX18 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
DHX40Q8IX18 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.12■■□□□ 1.13
DHX40Q8IX18 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
DHX40Q8IX18 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.12■■□□□ 1.13
DHX40Q8IX18 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
DHX40Q8IX18 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.12■■□□□ 1.13
DHX40Q8IX18 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.12■■□□□ 1.13
DHX40Q8IX18 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
DHX40Q8IX18 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DHX40Q8IX18 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
DHX40Q8IX18 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
DHX40Q8IX18 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DHX40Q8IX18 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.11■■□□□ 1.13
DHX40Q8IX18 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
DHX40Q8IX18 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
DHX40Q8IX18 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.11■■□□□ 1.13
DHX40Q8IX18 PGM5P4-201ENST00000421970 445 ntBASIC22.11■■□□□ 1.13
DHX40Q8IX18 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.11■■□□□ 1.13
DHX40Q8IX18 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC22.11■■□□□ 1.13
DHX40Q8IX18 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms