Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CRLF3Q8IUI8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 AC004408.2-201ENST00000623613 2777 ntBASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 DPP3P2-201ENST00000416030 1696 ntBASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 KRT87P-202ENST00000534226 1464 ntBASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CRLF3Q8IUI8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 AC120498.9-201ENST00000339021 3867 ntBASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 KRT16P2-201ENST00000414673 1423 ntBASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CRLF3Q8IUI8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CRLF3Q8IUI8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.83■□□□□ 0.76
CRLF3Q8IUI8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.83■□□□□ 0.76
CRLF3Q8IUI8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CRLF3Q8IUI8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CRLF3Q8IUI8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CRLF3Q8IUI8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CRLF3Q8IUI8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CRLF3Q8IUI8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CRLF3Q8IUI8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CRLF3Q8IUI8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CRLF3Q8IUI8 AC093484.2-201ENST00000580996 2166 ntBASIC19.83■□□□□ 0.76
CRLF3Q8IUI8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CRLF3Q8IUI8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CRLF3Q8IUI8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.82■□□□□ 0.76
CRLF3Q8IUI8 AC104187.1-201ENST00000607510 612 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms