Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 DUX4L26-201ENST00000489078 1255 ntBASIC21.14■□□□□ 0.97
RNF135Q8IUD6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
RNF135Q8IUD6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 AP000525.1-201ENST00000608286 694 ntBASIC21.13■□□□□ 0.97
RNF135Q8IUD6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF135Q8IUD6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 AC073508.3-201ENST00000619697 1419 ntBASIC21.12■□□□□ 0.97
RNF135Q8IUD6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 UNC93B2-201ENST00000285383 730 ntBASIC21.12■□□□□ 0.97
RNF135Q8IUD6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 MIR1238-201ENST00000408483 83 ntBASIC21.12■□□□□ 0.97
RNF135Q8IUD6 AL353807.1-201ENST00000427475 662 ntBASIC21.12■□□□□ 0.97
RNF135Q8IUD6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.12■□□□□ 0.97
RNF135Q8IUD6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 FEM1AP4-201ENST00000443167 1987 ntBASIC21.11■□□□□ 0.97
RNF135Q8IUD6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 AC104076.2-201ENST00000448912 469 ntBASIC21.11■□□□□ 0.97
RNF135Q8IUD6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF135Q8IUD6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF135Q8IUD6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF135Q8IUD6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF135Q8IUD6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
RNF135Q8IUD6 KRT18P22-201ENST00000402024 1347 ntBASIC21.1■□□□□ 0.97
RNF135Q8IUD6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF135Q8IUD6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF135Q8IUD6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF135Q8IUD6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms