Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC28Q86X40 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC28Q86X40 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC28Q86X40 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC28Q86X40 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC28Q86X40 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
LRRC28Q86X40 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRC28Q86X40 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.69■□□□□ 0.42
LRRC28Q86X40 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC28Q86X40 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC28Q86X40 UBE2DNL-204ENST00000602536 740 ntBASIC17.69■□□□□ 0.42
LRRC28Q86X40 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC28Q86X40 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.69■□□□□ 0.42
LRRC28Q86X40 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LRRC28Q86X40 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC28Q86X40 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC28Q86X40 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC28Q86X40 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.69■□□□□ 0.42
LRRC28Q86X40 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC28Q86X40 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.69■□□□□ 0.42
LRRC28Q86X40 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC28Q86X40 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC28Q86X40 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRRC28Q86X40 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC28Q86X40 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC28Q86X40 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC28Q86X40 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC28Q86X40 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC28Q86X40 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LRRC28Q86X40 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC28Q86X40 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC28Q86X40 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC28Q86X40 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC28Q86X40 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC28Q86X40 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC28Q86X40 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC28Q86X40 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.68■□□□□ 0.42
LRRC28Q86X40 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC28Q86X40 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.68■□□□□ 0.42
LRRC28Q86X40 AC008175.2-201ENST00000612840 297 ntBASIC17.68■□□□□ 0.42
LRRC28Q86X40 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC28Q86X40 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.68■□□□□ 0.42
LRRC28Q86X40 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC28Q86X40 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC28Q86X40 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.68■□□□□ 0.42
LRRC28Q86X40 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRRC28Q86X40 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC28Q86X40 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC28Q86X40 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC28Q86X40 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC28Q86X40 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 POU5F1P4-201ENST00000413175 1085 ntBASIC17.67■□□□□ 0.42
LRRC28Q86X40 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 SLC7A5P1-201ENST00000568957 537 ntBASIC17.67■□□□□ 0.42
LRRC28Q86X40 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC28Q86X40 MYCNOS-205ENST00000641950 531 ntBASIC17.67■□□□□ 0.42
LRRC28Q86X40 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC28Q86X40 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC28Q86X40 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC28Q86X40 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRRC28Q86X40 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.67■□□□□ 0.42
LRRC28Q86X40 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC28Q86X40 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC28Q86X40 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LRRC28Q86X40 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC28Q86X40 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC28Q86X40 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC28Q86X40 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC28Q86X40 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC28Q86X40 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC28Q86X40 CDCA4P2-201ENST00000441182 718 ntBASIC17.66■□□□□ 0.42
LRRC28Q86X40 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRC28Q86X40 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC28Q86X40 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.66■□□□□ 0.42
LRRC28Q86X40 MFSD11-216ENST00000590393 1141 ntBASIC17.66■□□□□ 0.42
LRRC28Q86X40 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.66■□□□□ 0.42
LRRC28Q86X40 AC073111.5-205ENST00000641717 521 ntBASIC17.66■□□□□ 0.42
LRRC28Q86X40 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC28Q86X40 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC28Q86X40 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC28Q86X40 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LRRC28Q86X40 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC28Q86X40 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LRRC28Q86X40 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LRRC28Q86X40 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.66■□□□□ 0.42
LRRC28Q86X40 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LRRC28Q86X40 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
LRRC28Q86X40 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms