Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 NFE2L3P1-201ENST00000588207 1959 ntBASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 KRT8P9-201ENST00000558927 1449 ntBASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00336Q6ZUF6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 KSR1P1-201ENST00000446298 240 ntBASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 AC116562.2-201ENST00000507042 360 ntBASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 C2orf69P3-201ENST00000565542 1120 ntBASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00336Q6ZUF6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00336Q6ZUF6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC00336Q6ZUF6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00336Q6ZUF6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00336Q6ZUF6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00336Q6ZUF6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
LINC00336Q6ZUF6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms