Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.31■□□□□ 0.36
C11orf88Q6PI97 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.31■□□□□ 0.36
C11orf88Q6PI97 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.3■□□□□ 0.36
C11orf88Q6PI97 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.3■□□□□ 0.36
C11orf88Q6PI97 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
C11orf88Q6PI97 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 NTF6G-201ENST00000591094 616 ntBASIC17.29■□□□□ 0.36
C11orf88Q6PI97 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 FP700111.2-201ENST00000619190 1892 ntBASIC17.29■□□□□ 0.36
C11orf88Q6PI97 AC026471.1-201ENST00000564629 3026 ntBASIC17.29■□□□□ 0.36
C11orf88Q6PI97 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.29■□□□□ 0.36
C11orf88Q6PI97 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
C11orf88Q6PI97 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms