Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CNKSR3Q6P9H4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 AC004980.1-204ENST00000429707 299 ntBASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 AC097488.1-201ENST00000507834 756 ntBASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNKSR3Q6P9H4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 CRYGFP-201ENST00000418459 633 ntBASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 YBX1P10-201ENST00000444752 975 ntBASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 AC131212.4-201ENST00000623606 975 ntBASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 AL024507.2-201ENST00000606070 2574 ntBASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CNKSR3Q6P9H4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 AC116351.2-201ENST00000606540 1585 ntBASIC21.53■■□□□ 1.04
CNKSR3Q6P9H4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 KRT18P16-201ENST00000510337 1294 ntBASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CNKSR3Q6P9H4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CNKSR3Q6P9H4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 TUBB8P6-201ENST00000436895 1288 ntBASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 BX664615.1-201ENST00000443558 458 ntBASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 AL121603.2-201ENST00000557373 2117 ntBASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CNKSR3Q6P9H4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNKSR3Q6P9H4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNKSR3Q6P9H4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNKSR3Q6P9H4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNKSR3Q6P9H4 TFP1-202ENST00000475455 1573 ntBASIC21.5■■□□□ 1.03
CNKSR3Q6P9H4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CNKSR3Q6P9H4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms