Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LYSMD4Q5XG99 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD4Q5XG99 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
LYSMD4Q5XG99 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD4Q5XG99 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.63■□□□□ 0.73
LYSMD4Q5XG99 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD4Q5XG99 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.63■□□□□ 0.73
LYSMD4Q5XG99 B3GAT3P1-201ENST00000471720 806 ntBASIC19.63■□□□□ 0.73
LYSMD4Q5XG99 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD4Q5XG99 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.63■□□□□ 0.73
LYSMD4Q5XG99 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD4Q5XG99 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LYSMD4Q5XG99 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.63■□□□□ 0.73
LYSMD4Q5XG99 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.63■□□□□ 0.73
LYSMD4Q5XG99 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 TSPY14P-201ENST00000303979 915 ntBASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 ECEL1P2-202ENST00000465689 757 ntBASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 AC128688.1-201ENST00000487626 519 ntBASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 AC006011.2-201ENST00000621313 1158 ntBASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 AL049796.1-201ENST00000565336 1766 ntBASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.62■□□□□ 0.73
LYSMD4Q5XG99 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 CRYGFP-201ENST00000418459 633 ntBASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.61■□□□□ 0.73
LYSMD4Q5XG99 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 AC097488.1-201ENST00000507834 756 ntBASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.6■□□□□ 0.73
LYSMD4Q5XG99 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LYSMD4Q5XG99 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms