Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
CACNA1EQ15878 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1EQ15878 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1EQ15878 FSCN1P1-201ENST00000568912 1481 ntBASIC19.49■□□□□ 0.71
CACNA1EQ15878 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1EQ15878 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1EQ15878 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
CACNA1EQ15878 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNA1EQ15878 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1EQ15878 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1EQ15878 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.49■□□□□ 0.71
CACNA1EQ15878 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1EQ15878 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1EQ15878 AL137013.1-201ENST00000432946 1228 ntBASIC19.49■□□□□ 0.71
CACNA1EQ15878 YBX1P10-201ENST00000444752 975 ntBASIC19.49■□□□□ 0.71
CACNA1EQ15878 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CACNA1EQ15878 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1EQ15878 KRT8P20-201ENST00000423953 1409 ntBASIC19.49■□□□□ 0.71
CACNA1EQ15878 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1EQ15878 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1EQ15878 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1EQ15878 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CACNA1EQ15878 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CACNA1EQ15878 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1EQ15878 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1EQ15878 AK4P3-201ENST00000418260 669 ntBASIC19.48■□□□□ 0.71
CACNA1EQ15878 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.48■□□□□ 0.71
CACNA1EQ15878 B3GAT3P1-201ENST00000471720 806 ntBASIC19.48■□□□□ 0.71
CACNA1EQ15878 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA1EQ15878 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.48■□□□□ 0.71
CACNA1EQ15878 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1EQ15878 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1EQ15878 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CACNA1EQ15878 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1EQ15878 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA1EQ15878 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1EQ15878 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1EQ15878 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1EQ15878 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1EQ15878 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1EQ15878 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA1EQ15878 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.48■□□□□ 0.71
CACNA1EQ15878 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA1EQ15878 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.48■□□□□ 0.71
CACNA1EQ15878 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CACNA1EQ15878 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA1EQ15878 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CACNA1EQ15878 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1EQ15878 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.48■□□□□ 0.71
CACNA1EQ15878 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CACNA1EQ15878 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CACNA1EQ15878 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CACNA1EQ15878 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.47■□□□□ 0.71
CACNA1EQ15878 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1EQ15878 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1EQ15878 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1EQ15878 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1EQ15878 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.47■□□□□ 0.71
CACNA1EQ15878 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.47■□□□□ 0.71
CACNA1EQ15878 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.47■□□□□ 0.71
CACNA1EQ15878 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
CACNA1EQ15878 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.47■□□□□ 0.71
CACNA1EQ15878 AL358472.4-201ENST00000633140 710 ntBASIC19.47■□□□□ 0.71
CACNA1EQ15878 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.47■□□□□ 0.71
CACNA1EQ15878 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.47■□□□□ 0.71
CACNA1EQ15878 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1EQ15878 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1EQ15878 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1EQ15878 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CACNA1EQ15878 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1EQ15878 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CACNA1EQ15878 ECEL1P1-201ENST00000373592 1742 ntBASIC19.46■□□□□ 0.71
CACNA1EQ15878 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1EQ15878 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1EQ15878 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1EQ15878 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.46■□□□□ 0.71
CACNA1EQ15878 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.46■□□□□ 0.71
CACNA1EQ15878 AC022616.7-201ENST00000525383 220 ntBASIC19.46■□□□□ 0.71
CACNA1EQ15878 KRT126P-201ENST00000549467 1181 ntBASIC19.46■□□□□ 0.71
CACNA1EQ15878 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.46■□□□□ 0.71
CACNA1EQ15878 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.46■□□□□ 0.71
CACNA1EQ15878 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1EQ15878 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.46■□□□□ 0.71
CACNA1EQ15878 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1EQ15878 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1EQ15878 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.46■□□□□ 0.71
CACNA1EQ15878 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1EQ15878 MYC-208ENST00000641036 567 ntBASIC19.46■□□□□ 0.71
CACNA1EQ15878 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1EQ15878 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CACNA1EQ15878 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CACNA1EQ15878 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1EQ15878 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1EQ15878 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1EQ15878 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1EQ15878 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1EQ15878 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.45■□□□□ 0.7
CACNA1EQ15878 FBXW4P1-201ENST00000426721 2239 ntBASIC19.45■□□□□ 0.7
CACNA1EQ15878 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CACNA1EQ15878 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms