Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.65■□□□□ 0.74
CDK3Q00526 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.65■□□□□ 0.74
CDK3Q00526 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDK3Q00526 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CDK3Q00526 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.65■□□□□ 0.74
CDK3Q00526 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CDK3Q00526 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CDK3Q00526 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDK3Q00526 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDK3Q00526 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDK3Q00526 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDK3Q00526 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CDK3Q00526 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CDK3Q00526 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
CDK3Q00526 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.64■□□□□ 0.73
CDK3Q00526 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK3Q00526 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.64■□□□□ 0.73
CDK3Q00526 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CDK3Q00526 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.64■□□□□ 0.73
CDK3Q00526 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.64■□□□□ 0.73
CDK3Q00526 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CDK3Q00526 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDK3Q00526 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDK3Q00526 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK3Q00526 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CDK3Q00526 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK3Q00526 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CDK3Q00526 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDK3Q00526 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK3Q00526 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK3Q00526 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.63■□□□□ 0.73
CDK3Q00526 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK3Q00526 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 RPS2P4-201ENST00000476944 856 ntBASIC19.63■□□□□ 0.73
CDK3Q00526 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK3Q00526 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.63■□□□□ 0.73
CDK3Q00526 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK3Q00526 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK3Q00526 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK3Q00526 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK3Q00526 BX119927.1-201ENST00000636596 1552 ntBASIC19.62■□□□□ 0.73
CDK3Q00526 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK3Q00526 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK3Q00526 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.62■□□□□ 0.73
CDK3Q00526 NBPF21P-201ENST00000425093 1451 ntBASIC19.62■□□□□ 0.73
CDK3Q00526 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.62■□□□□ 0.73
CDK3Q00526 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.62■□□□□ 0.73
CDK3Q00526 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK3Q00526 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK3Q00526 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDK3Q00526 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK3Q00526 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK3Q00526 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK3Q00526 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CDK3Q00526 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
CDK3Q00526 AL512408.1-201ENST00000569378 2000 ntBASIC19.61■□□□□ 0.73
CDK3Q00526 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CDK3Q00526 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDK3Q00526 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK3Q00526 GABARAPL3-202ENST00000624044 1851 ntBASIC19.61■□□□□ 0.73
CDK3Q00526 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK3Q00526 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK3Q00526 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDK3Q00526 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDK3Q00526 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.61■□□□□ 0.73
CDK3Q00526 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDK3Q00526 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.61■□□□□ 0.73
CDK3Q00526 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK3Q00526 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK3Q00526 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK3Q00526 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK3Q00526 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.61■□□□□ 0.73
CDK3Q00526 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK3Q00526 AC116351.2-201ENST00000606540 1585 ntBASIC19.61■□□□□ 0.73
CDK3Q00526 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK3Q00526 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CDK3Q00526 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK3Q00526 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK3Q00526 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK3Q00526 MIR718-201ENST00000390190 70 ntBASIC19.6■□□□□ 0.73
CDK3Q00526 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.6■□□□□ 0.73
CDK3Q00526 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK3Q00526 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CDK3Q00526 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms