Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NKX6-1P78426 AL391422.3-201ENST00000603791 2761 ntBASIC17.52■□□□□ 0.4
NKX6-1P78426 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-1P78426 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.52■□□□□ 0.4
NKX6-1P78426 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.52■□□□□ 0.4
NKX6-1P78426 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.52■□□□□ 0.4
NKX6-1P78426 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NKX6-1P78426 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-1P78426 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NKX6-1P78426 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-1P78426 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-1P78426 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-1P78426 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
NKX6-1P78426 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NKX6-1P78426 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NKX6-1P78426 AC233263.1-201ENST00000578059 224 ntBASIC17.52■□□□□ 0.4
NKX6-1P78426 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NKX6-1P78426 AC069544.1-201ENST00000609399 999 ntBASIC17.52■□□□□ 0.4
NKX6-1P78426 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.52■□□□□ 0.4
NKX6-1P78426 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
NKX6-1P78426 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.39
NKX6-1P78426 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NKX6-1P78426 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NKX6-1P78426 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NKX6-1P78426 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-1P78426 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NKX6-1P78426 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NKX6-1P78426 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.51■□□□□ 0.39
NKX6-1P78426 KRT17P2-201ENST00000300992 1314 ntBASIC17.51■□□□□ 0.39
NKX6-1P78426 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
NKX6-1P78426 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-1P78426 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-1P78426 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-1P78426 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NKX6-1P78426 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.51■□□□□ 0.39
NKX6-1P78426 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-1P78426 KRT8P36-201ENST00000489121 1440 ntBASIC17.51■□□□□ 0.39
NKX6-1P78426 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
NKX6-1P78426 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-1P78426 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.51■□□□□ 0.39
NKX6-1P78426 C2orf69P4-201ENST00000565394 541 ntBASIC17.51■□□□□ 0.39
NKX6-1P78426 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.51■□□□□ 0.39
NKX6-1P78426 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-1P78426 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-1P78426 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-1P78426 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-1P78426 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.51■□□□□ 0.39
NKX6-1P78426 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-1P78426 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-1P78426 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NKX6-1P78426 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.51■□□□□ 0.39
NKX6-1P78426 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NKX6-1P78426 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-1P78426 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NKX6-1P78426 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.5■□□□□ 0.39
NKX6-1P78426 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.5■□□□□ 0.39
NKX6-1P78426 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-1P78426 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.5■□□□□ 0.39
NKX6-1P78426 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NKX6-1P78426 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-1P78426 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-1P78426 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-1P78426 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-1P78426 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
NKX6-1P78426 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.5■□□□□ 0.39
NKX6-1P78426 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-1P78426 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.5■□□□□ 0.39
NKX6-1P78426 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-1P78426 BX088651.1-201ENST00000540551 451 ntBASIC17.5■□□□□ 0.39
NKX6-1P78426 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.5■□□□□ 0.39
NKX6-1P78426 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
NKX6-1P78426 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.5■□□□□ 0.39
NKX6-1P78426 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-1P78426 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-1P78426 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NKX6-1P78426 AC005229.4-201ENST00000610085 2198 ntBASIC17.5■□□□□ 0.39
NKX6-1P78426 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.5■□□□□ 0.39
NKX6-1P78426 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-1P78426 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-1P78426 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NKX6-1P78426 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.5■□□□□ 0.39
NKX6-1P78426 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NKX6-1P78426 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NKX6-1P78426 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-1P78426 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-1P78426 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-1P78426 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-1P78426 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.49■□□□□ 0.39
NKX6-1P78426 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.49■□□□□ 0.39
NKX6-1P78426 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.49■□□□□ 0.39
NKX6-1P78426 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.49■□□□□ 0.39
NKX6-1P78426 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.49■□□□□ 0.39
NKX6-1P78426 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-1P78426 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NKX6-1P78426 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-1P78426 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NKX6-1P78426 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms