Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
UBE2D3P61077 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 AC116562.4-201ENST00000641316 2276 ntBASIC14.15□□□□□ -0.14
UBE2D3P61077 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.15□□□□□ -0.14
UBE2D3P61077 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.15□□□□□ -0.14
UBE2D3P61077 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 KRT18P11-201ENST00000435214 1283 ntBASIC14.15□□□□□ -0.14
UBE2D3P61077 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
UBE2D3P61077 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.15□□□□□ -0.14
UBE2D3P61077 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.15□□□□□ -0.14
UBE2D3P61077 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.15□□□□□ -0.14
UBE2D3P61077 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.15□□□□□ -0.14
UBE2D3P61077 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
UBE2D3P61077 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
UBE2D3P61077 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UBE2D3P61077 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.15□□□□□ -0.14
UBE2D3P61077 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBE2D3P61077 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.15□□□□□ -0.15
UBE2D3P61077 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
UBE2D3P61077 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2D3P61077 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2D3P61077 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2D3P61077 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.14□□□□□ -0.15
UBE2D3P61077 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2D3P61077 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2D3P61077 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.14□□□□□ -0.15
UBE2D3P61077 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.14□□□□□ -0.15
UBE2D3P61077 AL162412.1-201ENST00000567129 965 ntBASIC14.14□□□□□ -0.15
UBE2D3P61077 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.14□□□□□ -0.15
UBE2D3P61077 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
UBE2D3P61077 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
UBE2D3P61077 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2D3P61077 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2D3P61077 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.14□□□□□ -0.15
UBE2D3P61077 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.14□□□□□ -0.15
UBE2D3P61077 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
UBE2D3P61077 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2D3P61077 BX119927.1-201ENST00000636596 1552 ntBASIC14.13□□□□□ -0.15
UBE2D3P61077 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D3P61077 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D3P61077 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2D3P61077 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2D3P61077 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D3P61077 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2D3P61077 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2D3P61077 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
UBE2D3P61077 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
UBE2D3P61077 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D3P61077 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D3P61077 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.13□□□□□ -0.15
UBE2D3P61077 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2D3P61077 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2D3P61077 AC007322.4-201ENST00000509611 723 ntBASIC14.13□□□□□ -0.15
UBE2D3P61077 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.13□□□□□ -0.15
UBE2D3P61077 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D3P61077 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2D3P61077 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2D3P61077 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
UBE2D3P61077 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D3P61077 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
UBE2D3P61077 AC013268.1-206ENST00000638368 961 ntBASIC14.13□□□□□ -0.15
UBE2D3P61077 AC112229.1-201ENST00000639295 961 ntBASIC14.13□□□□□ -0.15
UBE2D3P61077 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D3P61077 NEFHP1-201ENST00000412845 2629 ntBASIC14.13□□□□□ -0.15
UBE2D3P61077 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D3P61077 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2D3P61077 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBE2D3P61077 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D3P61077 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.13□□□□□ -0.15
UBE2D3P61077 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D3P61077 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2D3P61077 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms