Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC10.73□□□□□ -0.69
SEC61BP60468 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC10.73□□□□□ -0.69
SEC61BP60468 AP003071.4-201ENST00000562276 1284 ntBASIC10.73□□□□□ -0.69
SEC61BP60468 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC10.73□□□□□ -0.69
SEC61BP60468 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC10.73□□□□□ -0.69
SEC61BP60468 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC10.73□□□□□ -0.69
SEC61BP60468 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC10.73□□□□□ -0.69
SEC61BP60468 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
SEC61BP60468 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
SEC61BP60468 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC10.73□□□□□ -0.69
SEC61BP60468 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
SEC61BP60468 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC10.73□□□□□ -0.69
SEC61BP60468 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
SEC61BP60468 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC10.73□□□□□ -0.69
SEC61BP60468 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC10.72□□□□□ -0.69
SEC61BP60468 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
SEC61BP60468 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SEC61BP60468 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC10.72□□□□□ -0.69
SEC61BP60468 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC10.72□□□□□ -0.69
SEC61BP60468 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC10.72□□□□□ -0.69
SEC61BP60468 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC10.72□□□□□ -0.69
SEC61BP60468 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
SEC61BP60468 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 MMP23A-201ENST00000234610 1017 ntBASIC10.72□□□□□ -0.69
SEC61BP60468 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 AC087499.1-201ENST00000418141 1075 ntBASIC10.72□□□□□ -0.69
SEC61BP60468 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
SEC61BP60468 KRT18P21-201ENST00000515767 1272 ntBASIC10.72□□□□□ -0.69
SEC61BP60468 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
SEC61BP60468 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC10.72□□□□□ -0.69
SEC61BP60468 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 AL031963.3-201ENST00000606441 850 ntBASIC10.72□□□□□ -0.69
SEC61BP60468 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC10.72□□□□□ -0.69
SEC61BP60468 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
SEC61BP60468 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC10.72□□□□□ -0.69
SEC61BP60468 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC10.72□□□□□ -0.69
SEC61BP60468 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
SEC61BP60468 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC10.72□□□□□ -0.69
SEC61BP60468 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC10.72□□□□□ -0.69
SEC61BP60468 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC10.72□□□□□ -0.69
SEC61BP60468 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
SEC61BP60468 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SEC61BP60468 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SEC61BP60468 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SEC61BP60468 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC10.71□□□□□ -0.69
SEC61BP60468 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SEC61BP60468 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SEC61BP60468 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SEC61BP60468 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
SEC61BP60468 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SEC61BP60468 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.69
SEC61BP60468 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
SEC61BP60468 CALM3-202ENST00000391918 702 ntTSL 2 BASIC10.71□□□□□ -0.69
SEC61BP60468 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC10.71□□□□□ -0.69
SEC61BP60468 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SEC61BP60468 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC10.71□□□□□ -0.69
SEC61BP60468 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
SEC61BP60468 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC10.71□□□□□ -0.69
SEC61BP60468 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
SEC61BP60468 TERT-206ENST00000508104 2486 ntTSL 5 BASIC10.71□□□□□ -0.69
SEC61BP60468 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC10.71□□□□□ -0.69
SEC61BP60468 AL355075.4-201ENST00000554988 638 ntBASIC10.71□□□□□ -0.69
SEC61BP60468 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC10.71□□□□□ -0.69
SEC61BP60468 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC10.71□□□□□ -0.69
SEC61BP60468 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC10.71□□□□□ -0.69
SEC61BP60468 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC10.71□□□□□ -0.69
SEC61BP60468 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC10.71□□□□□ -0.69
SEC61BP60468 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
SEC61BP60468 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
SEC61BP60468 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SEC61BP60468 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms