Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN2P57739 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN2P57739 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.73■□□□□ 0.75
CLDN2P57739 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN2P57739 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.73■□□□□ 0.75
CLDN2P57739 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.73■□□□□ 0.75
CLDN2P57739 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.73■□□□□ 0.75
CLDN2P57739 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CLDN2P57739 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN2P57739 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLDN2P57739 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.72■□□□□ 0.75
CLDN2P57739 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN2P57739 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CLDN2P57739 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN2P57739 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.72■□□□□ 0.75
CLDN2P57739 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CLDN2P57739 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN2P57739 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.72■□□□□ 0.75
CLDN2P57739 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CLDN2P57739 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLDN2P57739 AC211429.1-201ENST00000415277 523 ntBASIC19.72■□□□□ 0.75
CLDN2P57739 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN2P57739 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
CLDN2P57739 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN2P57739 BX088651.1-201ENST00000540551 451 ntBASIC19.72■□□□□ 0.75
CLDN2P57739 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.72■□□□□ 0.75
CLDN2P57739 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.72■□□□□ 0.75
CLDN2P57739 AF186192.3-201ENST00000583427 947 ntBASIC19.72■□□□□ 0.75
CLDN2P57739 MIR4785-201ENST00000585005 73 ntBASIC19.72■□□□□ 0.75
CLDN2P57739 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN2P57739 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLDN2P57739 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN2P57739 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN2P57739 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLDN2P57739 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN2P57739 AC092720.2-201ENST00000602388 1665 ntBASIC19.71■□□□□ 0.75
CLDN2P57739 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN2P57739 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN2P57739 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLDN2P57739 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN2P57739 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CLDN2P57739 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN2P57739 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN2P57739 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.71■□□□□ 0.75
CLDN2P57739 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN2P57739 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN2P57739 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN2P57739 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN2P57739 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLDN2P57739 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLDN2P57739 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN2P57739 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLDN2P57739 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN2P57739 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN2P57739 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.7■□□□□ 0.74
CLDN2P57739 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN2P57739 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN2P57739 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN2P57739 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.7■□□□□ 0.74
CLDN2P57739 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.7■□□□□ 0.74
CLDN2P57739 AL355075.4-201ENST00000554988 638 ntBASIC19.7■□□□□ 0.74
CLDN2P57739 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.7■□□□□ 0.74
CLDN2P57739 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN2P57739 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN2P57739 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CLDN2P57739 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.7■□□□□ 0.74
CLDN2P57739 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN2P57739 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLDN2P57739 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLDN2P57739 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN2P57739 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.7■□□□□ 0.74
CLDN2P57739 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.69■□□□□ 0.74
CLDN2P57739 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CLDN2P57739 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN2P57739 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN2P57739 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN2P57739 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN2P57739 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN2P57739 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN2P57739 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CLDN2P57739 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN2P57739 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.69■□□□□ 0.74
CLDN2P57739 FAM197Y1-201ENST00000421178 764 ntBASIC19.69■□□□□ 0.74
CLDN2P57739 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.69■□□□□ 0.74
CLDN2P57739 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.69■□□□□ 0.74
CLDN2P57739 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN2P57739 AC004264.1-201ENST00000608354 794 ntBASIC19.69■□□□□ 0.74
CLDN2P57739 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN2P57739 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN2P57739 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.69■□□□□ 0.74
CLDN2P57739 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLDN2P57739 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CLDN2P57739 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN2P57739 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.68■□□□□ 0.74
CLDN2P57739 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN2P57739 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.68■□□□□ 0.74
CLDN2P57739 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.68■□□□□ 0.74
CLDN2P57739 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.68■□□□□ 0.74
CLDN2P57739 CD177P1-201ENST00000606252 935 ntBASIC19.68■□□□□ 0.74
CLDN2P57739 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms