Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.39■■□□□ 1.49
PDE1AP54750 GOLGA2P11-201ENST00000562660 1621 ntBASIC24.39■■□□□ 1.49
PDE1AP54750 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDE1AP54750 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDE1AP54750 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDE1AP54750 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDE1AP54750 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDE1AP54750 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDE1AP54750 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDE1AP54750 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PDE1AP54750 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC24.38■■□□□ 1.49
PDE1AP54750 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC24.38■■□□□ 1.49
PDE1AP54750 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC24.38■■□□□ 1.49
PDE1AP54750 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PDE1AP54750 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
PDE1AP54750 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC24.38■■□□□ 1.49
PDE1AP54750 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
PDE1AP54750 AC009237.14-201ENST00000609975 1594 ntBASIC24.37■■□□□ 1.49
PDE1AP54750 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC24.37■■□□□ 1.49
PDE1AP54750 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDE1AP54750 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PDE1AP54750 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDE1AP54750 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDE1AP54750 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
PDE1AP54750 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.37■■□□□ 1.49
PDE1AP54750 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.37■■□□□ 1.49
PDE1AP54750 GATS-209ENST00000454084 1030 ntTSL 3 BASIC24.37■■□□□ 1.49
PDE1AP54750 AC097658.1-201ENST00000475555 843 ntBASIC24.37■■□□□ 1.49
PDE1AP54750 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PDE1AP54750 AC005829.2-201ENST00000571422 1056 ntBASIC24.37■■□□□ 1.49
PDE1AP54750 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
PDE1AP54750 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDE1AP54750 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.37■■□□□ 1.49
PDE1AP54750 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
PDE1AP54750 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
PDE1AP54750 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDE1AP54750 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PDE1AP54750 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
PDE1AP54750 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDE1AP54750 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC24.36■■□□□ 1.49
PDE1AP54750 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDE1AP54750 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24.36■■□□□ 1.49
PDE1AP54750 HES2-206ENST00000489730 730 ntTSL 2 BASIC24.36■■□□□ 1.49
PDE1AP54750 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.36■■□□□ 1.49
PDE1AP54750 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC24.36■■□□□ 1.49
PDE1AP54750 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.36■■□□□ 1.49
PDE1AP54750 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.36■■□□□ 1.49
PDE1AP54750 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.36■■□□□ 1.49
PDE1AP54750 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PDE1AP54750 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PDE1AP54750 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDE1AP54750 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDE1AP54750 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PDE1AP54750 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE1AP54750 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE1AP54750 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE1AP54750 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
PDE1AP54750 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC24.35■■□□□ 1.49
PDE1AP54750 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE1AP54750 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
PDE1AP54750 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE1AP54750 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE1AP54750 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PDE1AP54750 HLA-L-209ENST00000420110 1011 ntBASIC24.35■■□□□ 1.49
PDE1AP54750 AC069152.1-201ENST00000438030 544 ntBASIC24.35■■□□□ 1.49
PDE1AP54750 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDE1AP54750 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.35■■□□□ 1.49
PDE1AP54750 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
PDE1AP54750 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC24.35■■□□□ 1.49
PDE1AP54750 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
PDE1AP54750 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC24.35■■□□□ 1.49
PDE1AP54750 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE1AP54750 AL158211.5-201ENST00000623583 2518 ntBASIC24.35■■□□□ 1.49
PDE1AP54750 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
PDE1AP54750 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PDE1AP54750 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC24.35■■□□□ 1.49
PDE1AP54750 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.35■■□□□ 1.49
PDE1AP54750 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE1AP54750 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE1AP54750 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE1AP54750 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PDE1AP54750 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC24.34■■□□□ 1.49
PDE1AP54750 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PDE1AP54750 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC24.34■■□□□ 1.49
PDE1AP54750 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PDE1AP54750 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PDE1AP54750 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.34■■□□□ 1.49
PDE1AP54750 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDE1AP54750 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC24.34■■□□□ 1.49
PDE1AP54750 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDE1AP54750 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDE1AP54750 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PDE1AP54750 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PDE1AP54750 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PDE1AP54750 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PDE1AP54750 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
PDE1AP54750 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
PDE1AP54750 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC24.33■■□□□ 1.49
PDE1AP54750 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.33■■□□□ 1.49
PDE1AP54750 PHGDH-210ENST00000641115 1638 ntBASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms