Protein–RNA interactions for Protein: P54108

CRISP3, Cysteine-rich secretory protein 3, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3P54108 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CRISP3P54108 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRISP3P54108 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRISP3P54108 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CRISP3P54108 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRISP3P54108 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.66■□□□□ 0.58
CRISP3P54108 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CRISP3P54108 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.66■□□□□ 0.58
CRISP3P54108 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CRISP3P54108 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.66■□□□□ 0.58
CRISP3P54108 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CRISP3P54108 AC068338.2-201ENST00000563278 1430 ntBASIC18.66■□□□□ 0.58
CRISP3P54108 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRISP3P54108 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRISP3P54108 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.65■□□□□ 0.58
CRISP3P54108 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CRISP3P54108 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.65■□□□□ 0.58
CRISP3P54108 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.65■□□□□ 0.58
CRISP3P54108 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CRISP3P54108 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CRISP3P54108 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRISP3P54108 TMEM179-206ENST00000616017 1645 ntBASIC18.65■□□□□ 0.58
CRISP3P54108 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRISP3P54108 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRISP3P54108 CNN2P6-201ENST00000439038 900 ntBASIC18.65■□□□□ 0.58
CRISP3P54108 DUX4L16-201ENST00000555130 1264 ntBASIC18.65■□□□□ 0.58
CRISP3P54108 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.65■□□□□ 0.58
CRISP3P54108 RARRES2P6-201ENST00000567333 442 ntBASIC18.65■□□□□ 0.58
CRISP3P54108 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CRISP3P54108 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.65■□□□□ 0.58
CRISP3P54108 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.65■□□□□ 0.58
CRISP3P54108 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CRISP3P54108 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.65■□□□□ 0.58
CRISP3P54108 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CRISP3P54108 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.65■□□□□ 0.58
CRISP3P54108 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.65■□□□□ 0.58
CRISP3P54108 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.65■□□□□ 0.58
CRISP3P54108 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.65■□□□□ 0.58
CRISP3P54108 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRISP3P54108 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CRISP3P54108 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CRISP3P54108 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CRISP3P54108 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CRISP3P54108 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CRISP3P54108 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CRISP3P54108 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.64■□□□□ 0.58
CRISP3P54108 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CRISP3P54108 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRISP3P54108 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRISP3P54108 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRISP3P54108 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.64■□□□□ 0.57
CRISP3P54108 AC026271.2-201ENST00000428091 497 ntBASIC18.64■□□□□ 0.57
CRISP3P54108 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.64■□□□□ 0.57
CRISP3P54108 AC006015.1-201ENST00000429970 570 ntBASIC18.64■□□□□ 0.57
CRISP3P54108 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.64■□□□□ 0.57
CRISP3P54108 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.64■□□□□ 0.57
CRISP3P54108 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CRISP3P54108 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.64■□□□□ 0.57
CRISP3P54108 AC011767.1-201ENST00000617410 1153 ntBASIC18.64■□□□□ 0.57
CRISP3P54108 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRISP3P54108 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.64■□□□□ 0.57
CRISP3P54108 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CRISP3P54108 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRISP3P54108 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRISP3P54108 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.64■□□□□ 0.57
CRISP3P54108 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRISP3P54108 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRISP3P54108 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRISP3P54108 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CRISP3P54108 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CRISP3P54108 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CRISP3P54108 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRISP3P54108 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CRISP3P54108 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.63■□□□□ 0.57
CRISP3P54108 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRISP3P54108 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRISP3P54108 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRISP3P54108 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CRISP3P54108 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CRISP3P54108 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRISP3P54108 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CRISP3P54108 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRISP3P54108 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.63■□□□□ 0.57
CRISP3P54108 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CRISP3P54108 AC069236.1-201ENST00000604339 616 ntBASIC18.63■□□□□ 0.57
CRISP3P54108 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CRISP3P54108 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRISP3P54108 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.63■□□□□ 0.57
CRISP3P54108 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRISP3P54108 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRISP3P54108 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CRISP3P54108 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.62■□□□□ 0.57
CRISP3P54108 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CRISP3P54108 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CRISP3P54108 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CRISP3P54108 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CRISP3P54108 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CRISP3P54108 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CRISP3P54108 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.62■□□□□ 0.57
CRISP3P54108 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms