Protein–RNA interactions for Protein: P53874

UBP10, Ubiquitin carboxyl-terminal hydrolase 10, yeastyeast

Predicted RBP Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP10P53874 SOV1YMR066W 2697 nt2.34□□□□□ -2.03
UBP10P53874 FAB1YFR019W 6837 nt2.33□□□□□ -2.04
UBP10P53874 SEC31YDL195W 3822 nt2.32□□□□□ -2.04
UBP10P53874 NEO1YIL048W 3456 nt2.32□□□□□ -2.04
UBP10P53874 FKS1YLR342W 5631 nt2.32□□□□□ -2.04
UBP10P53874 SKI3YPR189W 4299 nt2.31□□□□□ -2.04
UBP10P53874 PMD1YER132C 5262 nt2.3□□□□□ -2.04
UBP10P53874 USO1YDL058W 5373 nt2.28□□□□□ -2.04
UBP10P53874 SWI4YER111C 3282 nt2.28□□□□□ -2.04
UBP10P53874 YGR130CYGR130C 2451 nt2.27□□□□□ -2.05
UBP10P53874 LAA1YJL207C 6045 nt2.26□□□□□ -2.05
UBP10P53874 YNL284C-BYNL284C-B 5268 nt2.25□□□□□ -2.05
UBP10P53874 MLP2YIL149C 5040 nt2.23□□□□□ -2.05
UBP10P53874 YOR316C-AYOR316C-A 210 nt2.22□□□□□ -2.05
UBP10P53874 NUP145YGL092W 3954 nt2.22□□□□□ -2.05
UBP10P53874 MON2YNL297C 4911 nt2.21□□□□□ -2.06
UBP10P53874 BST1YFL025C 3090 nt2.21□□□□□ -2.06
UBP10P53874 PEP1YBL017C 4740 nt2.2□□□□□ -2.06
UBP10P53874 NUP188YML103C 4968 nt2.16□□□□□ -2.06
UBP10P53874 VAM6YDL077C 3150 nt2.15□□□□□ -2.07
UBP10P53874 FIG2YCR089W 4830 nt2.13□□□□□ -2.07
UBP10P53874 SBH2YER019C-A 267 nt2.12□□□□□ -2.07
UBP10P53874 YHR214C-BYHR214C-B 5382 nt2.11□□□□□ -2.07
UBP10P53874 YMR272W-BYMR272W-B 108 nt2.09□□□□□ -2.07
UBP10P53874 YPR117WYPR117W 7470 nt2.09□□□□□ -2.07
UBP10P53874 CDC39YCR093W 6327 nt2.08□□□□□ -2.08
UBP10P53874 DNF3YMR162C 4971 nt2.07□□□□□ -2.08
UBP10P53874 TMA7YLR262C-A 195 nt2.06□□□□□ -2.08
UBP10P53874 tC(GCA)QtC(GCA)Q 76 nt2.05□□□□□ -2.08
UBP10P53874 SSK2YNR031C 4740 nt2.04□□□□□ -2.08
UBP10P53874 BRR2YER172C 6492 nt2.04□□□□□ -2.08
UBP10P53874 CFT1YDR301W 4074 nt2□□□□□ -2.09
UBP10P53874 YMR247W-AYMR247W-A 144 nt2□□□□□ -2.09
UBP10P53874 MEC1YBR136W 7107 nt1.96□□□□□ -2.1
UBP10P53874 tT(UGU)HtT(UGU)H 72 nt1.96□□□□□ -2.1
UBP10P53874 YOR192C-BYOR192C-B 5313 nt1.96□□□□□ -2.1
UBP10P53874 SPT7YBR081C 3999 nt1.95□□□□□ -2.1
UBP10P53874 IRA1YBR140C 9279 nt1.86□□□□□ -2.11
UBP10P53874 RPL41BYDL133C-A 78 nt1.84□□□□□ -2.11
UBP10P53874 VPS15YBR097W 4365 nt1.84□□□□□ -2.12
UBP10P53874 BUD3YCL014W 4911 nt1.81□□□□□ -2.12
UBP10P53874 YOL014WYOL014W 375 nt1.8□□□□□ -2.12
UBP10P53874 LTE1YAL024C 4308 nt1.73□□□□□ -2.13
UBP10P53874 HKR1YDR420W 5409 nt1.72□□□□□ -2.13
UBP10P53874 RKR1YMR247C 4689 nt1.7□□□□□ -2.14
UBP10P53874 tQ(UUG)E2tQ(UUG)E2 72 nt1.7□□□□□ -2.14
UBP10P53874 PAU24YBR301W 363 nt1.7□□□□□ -2.14
UBP10P53874 YKL145W-AYKL145W-A 93 nt1.67□□□□□ -2.14
UBP10P53874 THO2YNL139C 4794 nt1.66□□□□□ -2.14
UBP10P53874 YML100W-AYML100W-A 174 nt1.65□□□□□ -2.15
UBP10P53874 CCH1YGR217W 6120 nt1.64□□□□□ -2.15
UBP10P53874 YBL100W-BYBL100W-B 5313 nt1.61□□□□□ -2.15
UBP10P53874 DOP1YDR141C 5097 nt1.6□□□□□ -2.15
UBP10P53874 snR58snR58 96 nt1.56□□□□□ -2.16
UBP10P53874 YOR335W-AYOR335W-A 81 nt1.56□□□□□ -2.16
UBP10P53874 ESP1YGR098C 4893 nt1.49□□□□□ -2.17
UBP10P53874 tH(GUG)E1tH(GUG)E1 72 nt1.48□□□□□ -2.17
UBP10P53874 tH(GUG)E2tH(GUG)E2 72 nt1.48□□□□□ -2.17
UBP10P53874 tH(GUG)G1tH(GUG)G1 72 nt1.48□□□□□ -2.17
UBP10P53874 tH(GUG)G2tH(GUG)G2 72 nt1.48□□□□□ -2.17
UBP10P53874 tH(GUG)HtH(GUG)H 72 nt1.48□□□□□ -2.17
UBP10P53874 tH(GUG)KtH(GUG)K 72 nt1.48□□□□□ -2.17
UBP10P53874 tH(GUG)MtH(GUG)M 72 nt1.48□□□□□ -2.17
UBP10P53874 snR6snR6 112 nt1.46□□□□□ -2.18
UBP10P53874 IML1YJR138W 4755 nt1.42□□□□□ -2.18
UBP10P53874 tF(GAA)BtF(GAA)B 73 nt1.37□□□□□ -2.19
UBP10P53874 tF(GAA)FtF(GAA)F 73 nt1.37□□□□□ -2.19
UBP10P53874 tF(GAA)GtF(GAA)G 73 nt1.37□□□□□ -2.19
UBP10P53874 tF(GAA)H1tF(GAA)H1 73 nt1.37□□□□□ -2.19
UBP10P53874 tF(GAA)H2tF(GAA)H2 73 nt1.37□□□□□ -2.19
UBP10P53874 tF(GAA)MtF(GAA)M 73 nt1.37□□□□□ -2.19
UBP10P53874 tF(GAA)P1tF(GAA)P1 73 nt1.37□□□□□ -2.19
UBP10P53874 tF(GAA)P2tF(GAA)P2 73 nt1.37□□□□□ -2.19
UBP10P53874 YJR029WYJR029W 5268 nt1.35□□□□□ -2.19
UBP10P53874 YPR137C-BYPR137C-B 5268 nt1.35□□□□□ -2.19
UBP10P53874 YJL113WYJL113W 4647 nt1.33□□□□□ -2.2
UBP10P53874 SCC2YDR180W 4482 nt1.32□□□□□ -2.2
UBP10P53874 BEM2YER155C 6504 nt1.31□□□□□ -2.2
UBP10P53874 tV(UAC)BtV(UAC)B 74 nt1.31□□□□□ -2.2
UBP10P53874 tV(UAC)DtV(UAC)D 74 nt1.31□□□□□ -2.2
UBP10P53874 PAU9YBL108C-A 129 nt1.31□□□□□ -2.2
UBP10P53874 FMP27YLR454W 7887 nt1.28□□□□□ -2.2
UBP10P53874 snR73snR73 106 nt1.25□□□□□ -2.21
UBP10P53874 YOR186C-AYOR186C-A 210 nt1.22□□□□□ -2.21
UBP10P53874 MLP1YKR095W 5628 nt1.17□□□□□ -2.22
UBP10P53874 IQG1YPL242C 4488 nt1.09□□□□□ -2.23
UBP10P53874 YMR272W-AYMR272W-A 114 nt1.09□□□□□ -2.23
UBP10P53874 EMT1tM(CAU)D 73 nt1.08□□□□□ -2.24
UBP10P53874 EMT5tM(CAU)J1 73 nt1.08□□□□□ -2.24
UBP10P53874 EMT3tM(CAU)J2 73 nt1.08□□□□□ -2.24
UBP10P53874 EMT4tM(CAU)M 73 nt1.08□□□□□ -2.24
UBP10P53874 EMT2tM(CAU)O2 73 nt1.08□□□□□ -2.24
UBP10P53874 snR161snR161 161 nt1.06□□□□□ -2.24
UBP10P53874 UTP20YBL004W 7482 nt0.96□□□□□ -2.26
UBP10P53874 snR128snR128 126 nt0.92□□□□□ -2.26
UBP10P53874 tA(UGC)QtA(UGC)Q 76 nt0.87□□□□□ -2.27
UBP10P53874 tT(AGU)BtT(AGU)B 73 nt0.82□□□□□ -2.28
UBP10P53874 tT(AGU)CtT(AGU)C 73 nt0.82□□□□□ -2.28
UBP10P53874 tT(AGU)DtT(AGU)D 73 nt0.82□□□□□ -2.28
UBP10P53874 tT(AGU)HtT(AGU)H 73 nt0.82□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms