Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PDX1P52945 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.37■□□□□ 0.69
PDX1P52945 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.37■□□□□ 0.69
PDX1P52945 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PDX1P52945 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PDX1P52945 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.37■□□□□ 0.69
PDX1P52945 AC133561.5-201ENST00000635547 218 ntBASIC19.37■□□□□ 0.69
PDX1P52945 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.37■□□□□ 0.69
PDX1P52945 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PDX1P52945 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDX1P52945 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PDX1P52945 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.36■□□□□ 0.69
PDX1P52945 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDX1P52945 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDX1P52945 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDX1P52945 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PDX1P52945 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDX1P52945 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDX1P52945 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDX1P52945 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDX1P52945 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.36■□□□□ 0.69
PDX1P52945 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.36■□□□□ 0.69
PDX1P52945 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.36■□□□□ 0.69
PDX1P52945 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.36■□□□□ 0.69
PDX1P52945 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDX1P52945 AC097493.4-201ENST00000641197 219 ntBASIC19.36■□□□□ 0.69
PDX1P52945 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDX1P52945 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.36■□□□□ 0.69
PDX1P52945 AC124283.5-201ENST00000624661 1809 ntBASIC19.36■□□□□ 0.69
PDX1P52945 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.36■□□□□ 0.69
PDX1P52945 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.36■□□□□ 0.69
PDX1P52945 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PDX1P52945 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDX1P52945 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.35■□□□□ 0.69
PDX1P52945 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PDX1P52945 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.35■□□□□ 0.69
PDX1P52945 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.35■□□□□ 0.69
PDX1P52945 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.35■□□□□ 0.69
PDX1P52945 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.35■□□□□ 0.69
PDX1P52945 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PDX1P52945 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.35■□□□□ 0.69
PDX1P52945 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PDX1P52945 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.35■□□□□ 0.69
PDX1P52945 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDX1P52945 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PDX1P52945 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.34■□□□□ 0.69
PDX1P52945 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDX1P52945 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDX1P52945 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDX1P52945 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDX1P52945 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDX1P52945 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDX1P52945 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDX1P52945 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.34■□□□□ 0.69
PDX1P52945 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PDX1P52945 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDX1P52945 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PDX1P52945 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.34■□□□□ 0.69
PDX1P52945 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.34■□□□□ 0.69
PDX1P52945 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.34■□□□□ 0.69
PDX1P52945 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.34■□□□□ 0.69
PDX1P52945 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.34■□□□□ 0.69
PDX1P52945 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.34■□□□□ 0.69
PDX1P52945 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDX1P52945 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDX1P52945 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDX1P52945 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.34■□□□□ 0.69
PDX1P52945 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.33■□□□□ 0.69
PDX1P52945 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PDX1P52945 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.33■□□□□ 0.68
PDX1P52945 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDX1P52945 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.33■□□□□ 0.68
PDX1P52945 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.33■□□□□ 0.68
PDX1P52945 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.33■□□□□ 0.68
PDX1P52945 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms