Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCNKAP51800 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCNKAP51800 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CLCNKAP51800 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CLCNKAP51800 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCNKAP51800 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLCNKAP51800 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.55■□□□□ 0.72
CLCNKAP51800 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.55■□□□□ 0.72
CLCNKAP51800 AL158047.1-201ENST00000445918 881 ntBASIC19.55■□□□□ 0.72
CLCNKAP51800 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.55■□□□□ 0.72
CLCNKAP51800 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.55■□□□□ 0.72
CLCNKAP51800 C1QBPP2-201ENST00000528754 825 ntBASIC19.55■□□□□ 0.72
CLCNKAP51800 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.55■□□□□ 0.72
CLCNKAP51800 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCNKAP51800 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.55■□□□□ 0.72
CLCNKAP51800 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.55■□□□□ 0.72
CLCNKAP51800 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLCNKAP51800 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.55■□□□□ 0.72
CLCNKAP51800 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCNKAP51800 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCNKAP51800 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCNKAP51800 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCNKAP51800 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCNKAP51800 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCNKAP51800 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCNKAP51800 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.54■□□□□ 0.72
CLCNKAP51800 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCNKAP51800 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCNKAP51800 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCNKAP51800 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCNKAP51800 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.54■□□□□ 0.72
CLCNKAP51800 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.54■□□□□ 0.72
CLCNKAP51800 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CLCNKAP51800 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.54■□□□□ 0.72
CLCNKAP51800 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCNKAP51800 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CLCNKAP51800 AP006294.2-201ENST00000641667 209 ntBASIC19.54■□□□□ 0.72
CLCNKAP51800 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.54■□□□□ 0.72
CLCNKAP51800 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCNKAP51800 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCNKAP51800 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCNKAP51800 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCNKAP51800 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCNKAP51800 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCNKAP51800 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCNKAP51800 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCNKAP51800 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLCNKAP51800 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCNKAP51800 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCNKAP51800 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLCNKAP51800 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCNKAP51800 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCNKAP51800 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.53■□□□□ 0.72
CLCNKAP51800 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCNKAP51800 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCNKAP51800 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.53■□□□□ 0.72
CLCNKAP51800 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCNKAP51800 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.53■□□□□ 0.72
CLCNKAP51800 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.53■□□□□ 0.72
CLCNKAP51800 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCNKAP51800 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCNKAP51800 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCNKAP51800 AC092667.1-201ENST00000434301 2586 ntBASIC19.53■□□□□ 0.72
CLCNKAP51800 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCNKAP51800 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCNKAP51800 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CLCNKAP51800 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CLCNKAP51800 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCNKAP51800 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
CLCNKAP51800 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCNKAP51800 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.52■□□□□ 0.72
CLCNKAP51800 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLCNKAP51800 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCNKAP51800 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLCNKAP51800 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.52■□□□□ 0.72
CLCNKAP51800 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
CLCNKAP51800 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCNKAP51800 AC124016.1-201ENST00000609552 612 ntBASIC19.52■□□□□ 0.72
CLCNKAP51800 AL121906.2-201ENST00000621597 723 ntBASIC19.52■□□□□ 0.72
CLCNKAP51800 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCNKAP51800 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.72
CLCNKAP51800 AC124283.5-201ENST00000624661 1809 ntBASIC19.52■□□□□ 0.72
CLCNKAP51800 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCNKAP51800 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCNKAP51800 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCNKAP51800 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCNKAP51800 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLCNKAP51800 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLCNKAP51800 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.52■□□□□ 0.71
CLCNKAP51800 AL157384.1-201ENST00000445995 2473 ntBASIC19.51■□□□□ 0.71
CLCNKAP51800 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCNKAP51800 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCNKAP51800 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCNKAP51800 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.51■□□□□ 0.71
CLCNKAP51800 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCNKAP51800 PRKY-204ENST00000533551 1019 ntBASIC19.51■□□□□ 0.71
CLCNKAP51800 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms