Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR4P51571 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR4P51571 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.31■□□□□ 0.52
SSR4P51571 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR4P51571 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.31■□□□□ 0.52
SSR4P51571 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SSR4P51571 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SSR4P51571 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.31■□□□□ 0.52
SSR4P51571 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.31■□□□□ 0.52
SSR4P51571 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.31■□□□□ 0.52
SSR4P51571 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.31■□□□□ 0.52
SSR4P51571 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR4P51571 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
SSR4P51571 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR4P51571 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
SSR4P51571 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SSR4P51571 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.31■□□□□ 0.52
SSR4P51571 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.31■□□□□ 0.52
SSR4P51571 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR4P51571 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SSR4P51571 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.3■□□□□ 0.52
SSR4P51571 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.3■□□□□ 0.52
SSR4P51571 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR4P51571 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR4P51571 AC020907.5-201ENST00000624372 1936 ntBASIC18.3■□□□□ 0.52
SSR4P51571 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR4P51571 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR4P51571 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSR4P51571 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.3■□□□□ 0.52
SSR4P51571 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.3■□□□□ 0.52
SSR4P51571 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.3■□□□□ 0.52
SSR4P51571 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SSR4P51571 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.3■□□□□ 0.52
SSR4P51571 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR4P51571 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.3■□□□□ 0.52
SSR4P51571 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.3■□□□□ 0.52
SSR4P51571 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR4P51571 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR4P51571 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR4P51571 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR4P51571 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SSR4P51571 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.3■□□□□ 0.52
SSR4P51571 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.3■□□□□ 0.52
SSR4P51571 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR4P51571 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR4P51571 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.29■□□□□ 0.52
SSR4P51571 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSR4P51571 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.29■□□□□ 0.52
SSR4P51571 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR4P51571 NBPF21P-201ENST00000425093 1451 ntBASIC18.29■□□□□ 0.52
SSR4P51571 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.29■□□□□ 0.52
SSR4P51571 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSR4P51571 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.29■□□□□ 0.52
SSR4P51571 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR4P51571 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR4P51571 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR4P51571 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SSR4P51571 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.29■□□□□ 0.52
SSR4P51571 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
SSR4P51571 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SSR4P51571 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.28■□□□□ 0.52
SSR4P51571 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.28■□□□□ 0.52
SSR4P51571 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.28■□□□□ 0.52
SSR4P51571 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.28■□□□□ 0.52
SSR4P51571 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.28■□□□□ 0.52
SSR4P51571 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.28■□□□□ 0.52
SSR4P51571 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.28■□□□□ 0.52
SSR4P51571 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SSR4P51571 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.28■□□□□ 0.52
SSR4P51571 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.28■□□□□ 0.52
SSR4P51571 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SSR4P51571 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR4P51571 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR4P51571 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.27■□□□□ 0.52
SSR4P51571 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.27■□□□□ 0.52
SSR4P51571 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
SSR4P51571 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SSR4P51571 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR4P51571 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SSR4P51571 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SSR4P51571 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SSR4P51571 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSR4P51571 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SSR4P51571 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.27■□□□□ 0.52
SSR4P51571 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms