Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB28P51157 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RAB28P51157 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB28P51157 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
RAB28P51157 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB28P51157 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB28P51157 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB28P51157 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
RAB28P51157 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB28P51157 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB28P51157 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RAB28P51157 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB28P51157 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB28P51157 AC128676.1-201ENST00000454392 318 ntBASIC19.27■□□□□ 0.68
RAB28P51157 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB28P51157 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB28P51157 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RAB28P51157 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RAB28P51157 AC069544.1-201ENST00000609399 999 ntBASIC19.27■□□□□ 0.68
RAB28P51157 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB28P51157 AC073648.6-201ENST00000641589 218 ntBASIC19.27■□□□□ 0.68
RAB28P51157 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB28P51157 AC124283.5-201ENST00000624661 1809 ntBASIC19.27■□□□□ 0.68
RAB28P51157 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
RAB28P51157 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB28P51157 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB28P51157 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB28P51157 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB28P51157 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB28P51157 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RAB28P51157 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RAB28P51157 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB28P51157 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB28P51157 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB28P51157 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB28P51157 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB28P51157 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB28P51157 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB28P51157 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB28P51157 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB28P51157 KRT18P29-201ENST00000397031 1267 ntBASIC19.26■□□□□ 0.67
RAB28P51157 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB28P51157 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB28P51157 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB28P51157 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB28P51157 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB28P51157 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RAB28P51157 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB28P51157 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB28P51157 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB28P51157 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.25■□□□□ 0.67
RAB28P51157 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB28P51157 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB28P51157 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB28P51157 AC099778.1-201ENST00000568593 1911 ntBASIC19.25■□□□□ 0.67
RAB28P51157 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB28P51157 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RAB28P51157 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB28P51157 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB28P51157 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB28P51157 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB28P51157 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.25■□□□□ 0.67
RAB28P51157 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB28P51157 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB28P51157 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB28P51157 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB28P51157 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RAB28P51157 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB28P51157 AL121906.2-201ENST00000621597 723 ntBASIC19.25■□□□□ 0.67
RAB28P51157 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RAB28P51157 AL391422.3-201ENST00000603791 2761 ntBASIC19.25■□□□□ 0.67
RAB28P51157 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB28P51157 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB28P51157 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB28P51157 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB28P51157 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RAB28P51157 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB28P51157 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB28P51157 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB28P51157 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
RAB28P51157 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB28P51157 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB28P51157 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RAB28P51157 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB28P51157 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB28P51157 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB28P51157 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RAB28P51157 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
RAB28P51157 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RAB28P51157 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB28P51157 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB28P51157 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.24■□□□□ 0.67
RAB28P51157 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB28P51157 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB28P51157 AL121829.2-201ENST00000620908 328 ntBASIC19.24■□□□□ 0.67
RAB28P51157 TMEM191A-211ENST00000637163 1067 ntBASIC19.24■□□□□ 0.67
RAB28P51157 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.24■□□□□ 0.67
RAB28P51157 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms