Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLCSP50747 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.01■□□□□ 0.63
HLCSP50747 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.01■□□□□ 0.63
HLCSP50747 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLCSP50747 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLCSP50747 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLCSP50747 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HLCSP50747 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLCSP50747 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLCSP50747 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HLCSP50747 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HLCSP50747 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.01■□□□□ 0.63
HLCSP50747 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19■□□□□ 0.63
HLCSP50747 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HLCSP50747 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
HLCSP50747 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLCSP50747 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19■□□□□ 0.63
HLCSP50747 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HLCSP50747 LSM12P1-201ENST00000411836 588 ntBASIC19■□□□□ 0.63
HLCSP50747 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLCSP50747 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19■□□□□ 0.63
HLCSP50747 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
HLCSP50747 AC097658.1-201ENST00000475555 843 ntBASIC19■□□□□ 0.63
HLCSP50747 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19■□□□□ 0.63
HLCSP50747 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
HLCSP50747 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLCSP50747 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19■□□□□ 0.63
HLCSP50747 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19■□□□□ 0.63
HLCSP50747 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HLCSP50747 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLCSP50747 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19■□□□□ 0.63
HLCSP50747 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLCSP50747 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
HLCSP50747 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.99■□□□□ 0.63
HLCSP50747 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HLCSP50747 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
HLCSP50747 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.99■□□□□ 0.63
HLCSP50747 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.99■□□□□ 0.63
HLCSP50747 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.99■□□□□ 0.63
HLCSP50747 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
HLCSP50747 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.99■□□□□ 0.63
HLCSP50747 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLCSP50747 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HLCSP50747 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLCSP50747 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLCSP50747 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.98■□□□□ 0.63
HLCSP50747 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLCSP50747 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLCSP50747 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLCSP50747 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
HLCSP50747 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLCSP50747 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLCSP50747 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HLCSP50747 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLCSP50747 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLCSP50747 ABHD17AP1-201ENST00000358206 933 ntBASIC18.98■□□□□ 0.63
HLCSP50747 MCRIP2P1-201ENST00000394346 511 ntBASIC18.98■□□□□ 0.63
HLCSP50747 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.98■□□□□ 0.63
HLCSP50747 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.98■□□□□ 0.63
HLCSP50747 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.98■□□□□ 0.63
HLCSP50747 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.98■□□□□ 0.63
HLCSP50747 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.98■□□□□ 0.63
HLCSP50747 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.98■□□□□ 0.63
HLCSP50747 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.98■□□□□ 0.63
HLCSP50747 MYC-209ENST00000641252 345 ntBASIC18.98■□□□□ 0.63
HLCSP50747 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HLCSP50747 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.98■□□□□ 0.63
HLCSP50747 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HLCSP50747 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLCSP50747 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.98■□□□□ 0.63
HLCSP50747 AC116050.2-201ENST00000612102 1779 ntBASIC18.98■□□□□ 0.63
HLCSP50747 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLCSP50747 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HLCSP50747 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HLCSP50747 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
HLCSP50747 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
HLCSP50747 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
HLCSP50747 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLCSP50747 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLCSP50747 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HLCSP50747 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLCSP50747 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLCSP50747 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HLCSP50747 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HLCSP50747 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HLCSP50747 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms