Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDC34P49427 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDC34P49427 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.73■□□□□ 0.11
CDC34P49427 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.73■□□□□ 0.11
CDC34P49427 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CDC34P49427 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.73■□□□□ 0.11
CDC34P49427 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC34P49427 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.72■□□□□ 0.11
CDC34P49427 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.72■□□□□ 0.11
CDC34P49427 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC34P49427 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC34P49427 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CDC34P49427 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDC34P49427 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDC34P49427 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC34P49427 BX842568.3-201ENST00000418104 571 ntBASIC15.72■□□□□ 0.11
CDC34P49427 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.72■□□□□ 0.11
CDC34P49427 RARRES2P1-201ENST00000474487 481 ntBASIC15.72■□□□□ 0.11
CDC34P49427 RARRES2P11-201ENST00000635158 484 ntBASIC15.72■□□□□ 0.11
CDC34P49427 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC34P49427 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CDC34P49427 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC34P49427 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CDC34P49427 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CDC34P49427 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC34P49427 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.72■□□□□ 0.11
CDC34P49427 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC34P49427 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC34P49427 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC34P49427 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC34P49427 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CDC34P49427 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CDC34P49427 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC34P49427 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.71■□□□□ 0.11
CDC34P49427 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CDC34P49427 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.71■□□□□ 0.11
CDC34P49427 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC34P49427 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.71■□□□□ 0.11
CDC34P49427 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC34P49427 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC34P49427 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC34P49427 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDC34P49427 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC34P49427 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
CDC34P49427 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC34P49427 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDC34P49427 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC34P49427 POU5F1P4-201ENST00000413175 1085 ntBASIC15.71■□□□□ 0.11
CDC34P49427 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.71■□□□□ 0.11
CDC34P49427 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CDC34P49427 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC34P49427 AC116050.2-201ENST00000612102 1779 ntBASIC15.71■□□□□ 0.11
CDC34P49427 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC34P49427 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
CDC34P49427 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CDC34P49427 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.71■□□□□ 0.1
CDC34P49427 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.71■□□□□ 0.1
CDC34P49427 CD37-204ENST00000535669 1674 ntTSL 2 BASIC15.7■□□□□ 0.1
CDC34P49427 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDC34P49427 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.7■□□□□ 0.1
CDC34P49427 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.7■□□□□ 0.1
CDC34P49427 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC34P49427 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CDC34P49427 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CDC34P49427 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC34P49427 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.7■□□□□ 0.1
CDC34P49427 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC34P49427 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.7■□□□□ 0.1
CDC34P49427 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.7■□□□□ 0.1
CDC34P49427 IGHV3-19-201ENST00000521488 291 ntBASIC15.7■□□□□ 0.1
CDC34P49427 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC34P49427 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.7■□□□□ 0.1
CDC34P49427 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC34P49427 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDC34P49427 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.7■□□□□ 0.1
CDC34P49427 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC34P49427 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDC34P49427 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDC34P49427 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.7■□□□□ 0.1
CDC34P49427 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC34P49427 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CDC34P49427 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDC34P49427 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.69■□□□□ 0.1
CDC34P49427 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC34P49427 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC34P49427 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC34P49427 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC34P49427 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC34P49427 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC34P49427 AC126544.1-201ENST00000580842 1059 ntBASIC15.69■□□□□ 0.1
CDC34P49427 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC34P49427 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDC34P49427 AC105233.4-201ENST00000642045 216 ntBASIC15.69■□□□□ 0.1
CDC34P49427 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC34P49427 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.69■□□□□ 0.1
CDC34P49427 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDC34P49427 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.69■□□□□ 0.1
CDC34P49427 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC34P49427 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDC34P49427 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms