Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSR1P43307 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SSR1P43307 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.13■□□□□ 0.97
SSR1P43307 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSR1P43307 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSR1P43307 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SSR1P43307 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.13■□□□□ 0.97
SSR1P43307 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.13■□□□□ 0.97
SSR1P43307 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SSR1P43307 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.13■□□□□ 0.97
SSR1P43307 RARRES2P4-201ENST00000514074 484 ntBASIC21.13■□□□□ 0.97
SSR1P43307 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.13■□□□□ 0.97
SSR1P43307 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SSR1P43307 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SSR1P43307 AC008694.1-202ENST00000636953 945 ntBASIC21.13■□□□□ 0.97
SSR1P43307 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSR1P43307 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSR1P43307 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSR1P43307 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSR1P43307 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SSR1P43307 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SSR1P43307 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SSR1P43307 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.12■□□□□ 0.97
SSR1P43307 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSR1P43307 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.12■□□□□ 0.97
SSR1P43307 AC007322.1-201ENST00000426983 750 ntBASIC21.12■□□□□ 0.97
SSR1P43307 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.12■□□□□ 0.97
SSR1P43307 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSR1P43307 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.12■□□□□ 0.97
SSR1P43307 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.12■□□□□ 0.97
SSR1P43307 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSR1P43307 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
SSR1P43307 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SSR1P43307 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SSR1P43307 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.12■□□□□ 0.97
SSR1P43307 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR1P43307 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR1P43307 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.11■□□□□ 0.97
SSR1P43307 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR1P43307 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SSR1P43307 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSR1P43307 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.11■□□□□ 0.97
SSR1P43307 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR1P43307 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SSR1P43307 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR1P43307 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR1P43307 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR1P43307 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR1P43307 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.11■□□□□ 0.97
SSR1P43307 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.11■□□□□ 0.97
SSR1P43307 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.11■□□□□ 0.97
SSR1P43307 AC022517.1-201ENST00000592429 346 ntBASIC21.11■□□□□ 0.97
SSR1P43307 AC069236.1-201ENST00000604339 616 ntBASIC21.11■□□□□ 0.97
SSR1P43307 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.11■□□□□ 0.97
SSR1P43307 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR1P43307 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SSR1P43307 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SSR1P43307 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.11■□□□□ 0.97
SSR1P43307 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR1P43307 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR1P43307 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSR1P43307 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR1P43307 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.1■□□□□ 0.97
SSR1P43307 AC120498.9-201ENST00000339021 3867 ntBASIC21.1■□□□□ 0.97
SSR1P43307 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.1■□□□□ 0.97
SSR1P43307 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR1P43307 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR1P43307 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR1P43307 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.1■□□□□ 0.97
SSR1P43307 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SSR1P43307 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR1P43307 MCRIP2P1-201ENST00000394346 511 ntBASIC21.1■□□□□ 0.97
SSR1P43307 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.1■□□□□ 0.97
SSR1P43307 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSR1P43307 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.1■□□□□ 0.97
SSR1P43307 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.1■□□□□ 0.97
SSR1P43307 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR1P43307 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR1P43307 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SSR1P43307 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSR1P43307 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SSR1P43307 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.09■□□□□ 0.97
SSR1P43307 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SSR1P43307 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR1P43307 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR1P43307 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.09■□□□□ 0.97
SSR1P43307 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.09■□□□□ 0.97
SSR1P43307 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.09■□□□□ 0.97
SSR1P43307 CYP2T1P-201ENST00000432607 1285 ntBASIC21.09■□□□□ 0.97
SSR1P43307 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
SSR1P43307 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.09■□□□□ 0.97
SSR1P43307 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.09■□□□□ 0.97
SSR1P43307 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR1P43307 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
SSR1P43307 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.09■□□□□ 0.97
SSR1P43307 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
SSR1P43307 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR1P43307 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SSR1P43307 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.09■□□□□ 0.97
SSR1P43307 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms