Protein–RNA interactions for Protein: P40161

RTT106, Histone chaperone RTT106, yeastyeast

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTT106P40161 tV(UAC)BtV(UAC)B 74 nt1.92□□□□□ -2.1
RTT106P40161 tV(UAC)DtV(UAC)D 74 nt1.92□□□□□ -2.1
RTT106P40161 YBR296C-AYBR296C-A 120 nt1.92□□□□□ -2.1
RTT106P40161 CDC39YCR093W 6327 nt1.92□□□□□ -2.1
RTT106P40161 APL3YBL037W 3078 nt1.92□□□□□ -2.1
RTT106P40161 NUP188YML103C 4968 nt1.91□□□□□ -2.1
RTT106P40161 NIP1YMR309C 2439 nt1.9□□□□□ -2.1
RTT106P40161 BUD3YCL014W 4911 nt1.9□□□□□ -2.11
RTT106P40161 BST1YFL025C 3090 nt1.88□□□□□ -2.11
RTT106P40161 YNL054W-BYNL054W-B 5250 nt1.88□□□□□ -2.11
RTT106P40161 CLU1YMR012W 3834 nt1.87□□□□□ -2.11
RTT106P40161 YMR247W-AYMR247W-A 144 nt1.87□□□□□ -2.11
RTT106P40161 RDS3YPR094W 324 nt1.87□□□□□ -2.11
RTT106P40161 SEC8YPR055W 3198 nt1.87□□□□□ -2.11
RTT106P40161 ULP2YIL031W 3105 nt1.86□□□□□ -2.11
RTT106P40161 IRA1YBR140C 9279 nt1.86□□□□□ -2.11
RTT106P40161 SWI4YER111C 3282 nt1.86□□□□□ -2.11
RTT106P40161 SEC3YER008C 4011 nt1.86□□□□□ -2.11
RTT106P40161 SIP4YJL089W 2490 nt1.84□□□□□ -2.11
RTT106P40161 YPL060C-AYPL060C-A 3315 nt1.82□□□□□ -2.12
RTT106P40161 YLR399W-AYLR399W-A 105 nt1.82□□□□□ -2.12
RTT106P40161 YSP1YHR155W 3687 nt1.79□□□□□ -2.12
RTT106P40161 NUP145YGL092W 3954 nt1.78□□□□□ -2.12
RTT106P40161 EST2YLR318W 2655 nt1.78□□□□□ -2.12
RTT106P40161 PET111YMR257C 2403 nt1.78□□□□□ -2.12
RTT106P40161 YNL284C-BYNL284C-B 5268 nt1.75□□□□□ -2.13
RTT106P40161 HKR1YDR420W 5409 nt1.74□□□□□ -2.13
RTT106P40161 ROM2YLR371W 4071 nt1.71□□□□□ -2.14
RTT106P40161 MSN5YDR335W 3675 nt1.7□□□□□ -2.14
RTT106P40161 BUL2YML111W 2763 nt1.7□□□□□ -2.14
RTT106P40161 FYV8YGR196C 2454 nt1.69□□□□□ -2.14
RTT106P40161 SPC110YDR356W 2835 nt1.68□□□□□ -2.14
RTT106P40161 tQ(UUG)QtQ(UUG)Q 76 nt1.68□□□□□ -2.14
RTT106P40161 tF(GAA)BtF(GAA)B 73 nt1.67□□□□□ -2.14
RTT106P40161 tF(GAA)FtF(GAA)F 73 nt1.67□□□□□ -2.14
RTT106P40161 tF(GAA)GtF(GAA)G 73 nt1.67□□□□□ -2.14
RTT106P40161 tF(GAA)H1tF(GAA)H1 73 nt1.67□□□□□ -2.14
RTT106P40161 tF(GAA)H2tF(GAA)H2 73 nt1.67□□□□□ -2.14
RTT106P40161 tF(GAA)MtF(GAA)M 73 nt1.67□□□□□ -2.14
RTT106P40161 tF(GAA)P1tF(GAA)P1 73 nt1.67□□□□□ -2.14
RTT106P40161 tF(GAA)P2tF(GAA)P2 73 nt1.67□□□□□ -2.14
RTT106P40161 YLL006W-AYLL006W-A 177 nt1.67□□□□□ -2.14
RTT106P40161 NST1YNL091W 3723 nt1.67□□□□□ -2.14
RTT106P40161 YJL077W-AYJL077W-A 87 nt1.61□□□□□ -2.15
RTT106P40161 SPT7YBR081C 3999 nt1.59□□□□□ -2.16
RTT106P40161 RKR1YMR247C 4689 nt1.58□□□□□ -2.16
RTT106P40161 YOR192C-BYOR192C-B 5313 nt1.54□□□□□ -2.16
RTT106P40161 BEM2YER155C 6504 nt1.53□□□□□ -2.16
RTT106P40161 YER090C-AYER090C-A 90 nt1.53□□□□□ -2.16
RTT106P40161 YJR029WYJR029W 5268 nt1.53□□□□□ -2.16
RTT106P40161 YPR137C-BYPR137C-B 5268 nt1.53□□□□□ -2.16
RTT106P40161 UTP20YBL004W 7482 nt1.51□□□□□ -2.17
RTT106P40161 YOL014WYOL014W 375 nt1.43□□□□□ -2.18
RTT106P40161 MLP2YIL149C 5040 nt1.43□□□□□ -2.18
RTT106P40161 snR67snR67 82 nt1.37□□□□□ -2.19
RTT106P40161 YDL114W-AYDL114W-A 114 nt1.37□□□□□ -2.19
RTT106P40161 YOR376W-AYOR376W-A 156 nt1.36□□□□□ -2.19
RTT106P40161 VAM6YDL077C 3150 nt1.35□□□□□ -2.19
RTT106P40161 YMR160WYMR160W 2451 nt1.33□□□□□ -2.2
RTT106P40161 tV(UAC)QtV(UAC)Q 76 nt1.32□□□□□ -2.2
RTT106P40161 THO2YNL139C 4794 nt1.31□□□□□ -2.2
RTT106P40161 YPR117WYPR117W 7470 nt1.31□□□□□ -2.2
RTT106P40161 DOP1YDR141C 5097 nt1.31□□□□□ -2.2
RTT106P40161 YKL106C-AYKL106C-A 120 nt1.28□□□□□ -2.2
RTT106P40161 YKL145W-AYKL145W-A 93 nt1.25□□□□□ -2.21
RTT106P40161 SCC2YDR180W 4482 nt1.23□□□□□ -2.21
RTT106P40161 snR40snR40 97 nt1.16□□□□□ -2.22
RTT106P40161 EMT1tM(CAU)D 73 nt1.13□□□□□ -2.23
RTT106P40161 EMT5tM(CAU)J1 73 nt1.13□□□□□ -2.23
RTT106P40161 EMT3tM(CAU)J2 73 nt1.13□□□□□ -2.23
RTT106P40161 EMT4tM(CAU)M 73 nt1.13□□□□□ -2.23
RTT106P40161 EMT2tM(CAU)O2 73 nt1.13□□□□□ -2.23
RTT106P40161 tT(AGU)BtT(AGU)B 73 nt1.13□□□□□ -2.23
RTT106P40161 tT(AGU)CtT(AGU)C 73 nt1.13□□□□□ -2.23
RTT106P40161 tT(AGU)DtT(AGU)D 73 nt1.13□□□□□ -2.23
RTT106P40161 tT(AGU)HtT(AGU)H 73 nt1.13□□□□□ -2.23
RTT106P40161 tT(AGU)I1tT(AGU)I1 73 nt1.13□□□□□ -2.23
RTT106P40161 tT(AGU)I2tT(AGU)I2 73 nt1.13□□□□□ -2.23
RTT106P40161 tT(AGU)JtT(AGU)J 73 nt1.13□□□□□ -2.23
RTT106P40161 tT(AGU)N1tT(AGU)N1 73 nt1.13□□□□□ -2.23
RTT106P40161 tT(AGU)N2tT(AGU)N2 73 nt1.13□□□□□ -2.23
RTT106P40161 tT(AGU)O1tT(AGU)O1 73 nt1.13□□□□□ -2.23
RTT106P40161 tT(AGU)O2tT(AGU)O2 73 nt1.13□□□□□ -2.23
RTT106P40161 LTE1YAL024C 4308 nt1.11□□□□□ -2.23
RTT106P40161 YBL100W-BYBL100W-B 5313 nt1.09□□□□□ -2.24
RTT106P40161 IQG1YPL242C 4488 nt0.99□□□□□ -2.25
RTT106P40161 snR77snR77 88 nt0.95□□□□□ -2.26
RTT106P40161 FMP27YLR454W 7887 nt0.93□□□□□ -2.26
RTT106P40161 YML100W-AYML100W-A 174 nt0.92□□□□□ -2.26
RTT106P40161 YOR316C-AYOR316C-A 210 nt0.89□□□□□ -2.27
RTT106P40161 SOV1YMR066W 2697 nt0.87□□□□□ -2.27
RTT106P40161 YPR159C-AYPR159C-A 102 nt0.84□□□□□ -2.27
RTT106P40161 UTP10YJL109C 5310 nt0.83□□□□□ -2.28
RTT106P40161 MLP1YKR095W 5628 nt0.82□□□□□ -2.28
RTT106P40161 SBH2YER019C-A 267 nt0.8□□□□□ -2.28
RTT106P40161 YOR186C-AYOR186C-A 210 nt0.72□□□□□ -2.29
RTT106P40161 YMR272W-AYMR272W-A 114 nt0.71□□□□□ -2.3
RTT106P40161 ESP1YGR098C 4893 nt0.64□□□□□ -2.31
RTT106P40161 PAU9YBL108C-A 129 nt0.64□□□□□ -2.31
RTT106P40161 snR128snR128 126 nt0.52□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 32.9 ms