Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.92■□□□□ 0.62
RPL3P39023 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
RPL3P39023 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPL3P39023 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RPL3P39023 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPL3P39023 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPL3P39023 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPL3P39023 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPL3P39023 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.91■□□□□ 0.62
RPL3P39023 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.91■□□□□ 0.62
RPL3P39023 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPL3P39023 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPL3P39023 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.91■□□□□ 0.62
RPL3P39023 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPL3P39023 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RPL3P39023 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPL3P39023 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPL3P39023 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RPL3P39023 AC023632.3-201ENST00000521633 145 ntBASIC18.91■□□□□ 0.62
RPL3P39023 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPL3P39023 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.91■□□□□ 0.62
RPL3P39023 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.91■□□□□ 0.62
RPL3P39023 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.91■□□□□ 0.62
RPL3P39023 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
RPL3P39023 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPL3P39023 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.91■□□□□ 0.62
RPL3P39023 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPL3P39023 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPL3P39023 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPL3P39023 AC010980.2-201ENST00000587099 1412 ntBASIC18.91■□□□□ 0.62
RPL3P39023 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RPL3P39023 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RPL3P39023 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RPL3P39023 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RPL3P39023 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.9■□□□□ 0.62
RPL3P39023 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RPL3P39023 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 AP001271.2-201ENST00000624018 1556 ntBASIC18.9■□□□□ 0.62
RPL3P39023 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RPL3P39023 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.9■□□□□ 0.62
RPL3P39023 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.9■□□□□ 0.62
RPL3P39023 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.9■□□□□ 0.62
RPL3P39023 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.9■□□□□ 0.62
RPL3P39023 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.9■□□□□ 0.62
RPL3P39023 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.9■□□□□ 0.62
RPL3P39023 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.9■□□□□ 0.62
RPL3P39023 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.9■□□□□ 0.62
RPL3P39023 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
RPL3P39023 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPL3P39023 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.89■□□□□ 0.61
RPL3P39023 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPL3P39023 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.89■□□□□ 0.61
RPL3P39023 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPL3P39023 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RPL3P39023 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPL3P39023 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPL3P39023 C2orf69P4-201ENST00000565394 541 ntBASIC18.89■□□□□ 0.61
RPL3P39023 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
RPL3P39023 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.89■□□□□ 0.61
RPL3P39023 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RPL3P39023 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.89■□□□□ 0.61
RPL3P39023 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.89■□□□□ 0.61
RPL3P39023 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPL3P39023 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.89■□□□□ 0.61
RPL3P39023 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPL3P39023 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPL3P39023 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
RPL3P39023 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RPL3P39023 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RPL3P39023 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPL3P39023 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPL3P39023 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPL3P39023 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPL3P39023 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
RPL3P39023 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.88■□□□□ 0.61
RPL3P39023 AC005181.1-201ENST00000604782 1256 ntBASIC18.88■□□□□ 0.61
RPL3P39023 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPL3P39023 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPL3P39023 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPL3P39023 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPL3P39023 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPL3P39023 AC125437.2-201ENST00000625180 2167 ntBASIC18.88■□□□□ 0.61
RPL3P39023 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.88■□□□□ 0.61
RPL3P39023 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms