Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.8■□□□□ 0.92
SCNN1AP37088 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCNN1AP37088 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCNN1AP37088 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SCNN1AP37088 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCNN1AP37088 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCNN1AP37088 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCNN1AP37088 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SCNN1AP37088 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCNN1AP37088 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCNN1AP37088 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCNN1AP37088 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCNN1AP37088 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCNN1AP37088 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.79■□□□□ 0.92
SCNN1AP37088 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SCNN1AP37088 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SCNN1AP37088 AC008687.6-201ENST00000596318 630 ntBASIC20.79■□□□□ 0.92
SCNN1AP37088 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.79■□□□□ 0.92
SCNN1AP37088 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.79■□□□□ 0.92
SCNN1AP37088 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCNN1AP37088 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.79■□□□□ 0.92
SCNN1AP37088 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCNN1AP37088 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCNN1AP37088 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.79■□□□□ 0.92
SCNN1AP37088 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.79■□□□□ 0.92
SCNN1AP37088 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCNN1AP37088 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SCNN1AP37088 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCNN1AP37088 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.78■□□□□ 0.92
SCNN1AP37088 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.78■□□□□ 0.92
SCNN1AP37088 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCNN1AP37088 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.78■□□□□ 0.92
SCNN1AP37088 RPS2P52-201ENST00000469610 820 ntBASIC20.78■□□□□ 0.92
SCNN1AP37088 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.78■□□□□ 0.92
SCNN1AP37088 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCNN1AP37088 AC112907.3-201ENST00000577781 2400 ntBASIC20.78■□□□□ 0.92
SCNN1AP37088 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCNN1AP37088 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCNN1AP37088 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SCNN1AP37088 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCNN1AP37088 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SCNN1AP37088 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.78■□□□□ 0.92
SCNN1AP37088 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.77■□□□□ 0.92
SCNN1AP37088 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCNN1AP37088 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.77■□□□□ 0.92
SCNN1AP37088 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCNN1AP37088 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCNN1AP37088 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SCNN1AP37088 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCNN1AP37088 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SCNN1AP37088 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
SCNN1AP37088 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.77■□□□□ 0.92
SCNN1AP37088 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.77■□□□□ 0.92
SCNN1AP37088 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.77■□□□□ 0.92
SCNN1AP37088 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.77■□□□□ 0.92
SCNN1AP37088 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SCNN1AP37088 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SCNN1AP37088 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
SCNN1AP37088 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SCNN1AP37088 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SCNN1AP37088 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SCNN1AP37088 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.76■□□□□ 0.91
SCNN1AP37088 AC018553.1-201ENST00000616682 1458 ntBASIC20.76■□□□□ 0.91
SCNN1AP37088 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.76■□□□□ 0.91
SCNN1AP37088 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCNN1AP37088 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SCNN1AP37088 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCNN1AP37088 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.76■□□□□ 0.91
SCNN1AP37088 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.76■□□□□ 0.91
SCNN1AP37088 RNA5SP413-201ENST00000516373 109 ntBASIC20.76■□□□□ 0.91
SCNN1AP37088 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.76■□□□□ 0.91
SCNN1AP37088 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.76■□□□□ 0.91
SCNN1AP37088 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCNN1AP37088 AL121906.2-201ENST00000621597 723 ntBASIC20.76■□□□□ 0.91
SCNN1AP37088 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCNN1AP37088 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.76■□□□□ 0.91
SCNN1AP37088 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCNN1AP37088 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCNN1AP37088 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.76■□□□□ 0.91
SCNN1AP37088 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.76■□□□□ 0.91
SCNN1AP37088 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCNN1AP37088 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.76■□□□□ 0.91
SCNN1AP37088 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.76■□□□□ 0.91
SCNN1AP37088 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCNN1AP37088 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCNN1AP37088 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.75■□□□□ 0.91
SCNN1AP37088 AC008403.3-201ENST00000598924 454 ntBASIC20.75■□□□□ 0.91
SCNN1AP37088 AL121829.2-201ENST00000620908 328 ntBASIC20.75■□□□□ 0.91
SCNN1AP37088 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCNN1AP37088 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.75■□□□□ 0.91
SCNN1AP37088 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.75■□□□□ 0.91
SCNN1AP37088 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCNN1AP37088 TFP1-202ENST00000475455 1573 ntBASIC20.75■□□□□ 0.91
SCNN1AP37088 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCNN1AP37088 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SCNN1AP37088 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCNN1AP37088 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCNN1AP37088 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCNN1AP37088 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCNN1AP37088 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms