Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 UPK3BP1-201ENST00000428678 509 ntBASIC24.68■■□□□ 1.54
PDE6BP35913 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC24.68■■□□□ 1.54
PDE6BP35913 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDE6BP35913 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC24.68■■□□□ 1.54
PDE6BP35913 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
PDE6BP35913 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC24.68■■□□□ 1.54
PDE6BP35913 AC131212.4-201ENST00000623606 975 ntBASIC24.68■■□□□ 1.54
PDE6BP35913 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC24.68■■□□□ 1.54
PDE6BP35913 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDE6BP35913 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDE6BP35913 AC233723.2-201ENST00000623798 2106 ntBASIC24.67■■□□□ 1.54
PDE6BP35913 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDE6BP35913 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC24.67■■□□□ 1.54
PDE6BP35913 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC24.67■■□□□ 1.54
PDE6BP35913 AL358472.4-201ENST00000633140 710 ntBASIC24.67■■□□□ 1.54
PDE6BP35913 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDE6BP35913 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PDE6BP35913 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PDE6BP35913 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.67■■□□□ 1.54
PDE6BP35913 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDE6BP35913 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDE6BP35913 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.67■■□□□ 1.54
PDE6BP35913 ECEL1P1-201ENST00000373592 1742 ntBASIC24.66■■□□□ 1.54
PDE6BP35913 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDE6BP35913 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDE6BP35913 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDE6BP35913 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PDE6BP35913 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDE6BP35913 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDE6BP35913 INGX-201ENST00000359239 846 ntBASIC24.66■■□□□ 1.54
PDE6BP35913 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PDE6BP35913 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PDE6BP35913 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.66■■□□□ 1.54
PDE6BP35913 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PDE6BP35913 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PDE6BP35913 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PDE6BP35913 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PDE6BP35913 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDE6BP35913 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDE6BP35913 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDE6BP35913 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PDE6BP35913 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDE6BP35913 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDE6BP35913 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC24.65■■□□□ 1.54
PDE6BP35913 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC24.65■■□□□ 1.54
PDE6BP35913 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC24.65■■□□□ 1.54
PDE6BP35913 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDE6BP35913 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDE6BP35913 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDE6BP35913 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PDE6BP35913 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.64■■□□□ 1.54
PDE6BP35913 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC24.64■■□□□ 1.54
PDE6BP35913 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDE6BP35913 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
PDE6BP35913 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDE6BP35913 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDE6BP35913 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.64■■□□□ 1.54
PDE6BP35913 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC24.64■■□□□ 1.54
PDE6BP35913 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDE6BP35913 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDE6BP35913 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDE6BP35913 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC24.64■■□□□ 1.54
PDE6BP35913 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
PDE6BP35913 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.64■■□□□ 1.54
PDE6BP35913 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PDE6BP35913 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PDE6BP35913 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
PDE6BP35913 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
PDE6BP35913 H19-201ENST00000411754 1788 ntTSL 5 BASIC24.64■■□□□ 1.53
PDE6BP35913 STK25-204ENST00000405585 1643 ntTSL 2 BASIC24.64■■□□□ 1.53
PDE6BP35913 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PDE6BP35913 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PDE6BP35913 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PDE6BP35913 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PDE6BP35913 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDE6BP35913 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.63■■□□□ 1.53
PDE6BP35913 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDE6BP35913 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDE6BP35913 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC24.63■■□□□ 1.53
PDE6BP35913 HMGA1P5-201ENST00000412453 271 ntBASIC24.63■■□□□ 1.53
PDE6BP35913 AC117947.1-201ENST00000427448 529 ntBASIC24.63■■□□□ 1.53
PDE6BP35913 YBX1P10-201ENST00000444752 975 ntBASIC24.63■■□□□ 1.53
PDE6BP35913 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC24.63■■□□□ 1.53
PDE6BP35913 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC24.63■■□□□ 1.53
PDE6BP35913 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC24.63■■□□□ 1.53
PDE6BP35913 MED25-212ENST00000618715 1467 ntTSL 5 BASIC24.63■■□□□ 1.53
PDE6BP35913 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
PDE6BP35913 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.63■■□□□ 1.53
PDE6BP35913 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PDE6BP35913 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC24.63■■□□□ 1.53
PDE6BP35913 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.63■■□□□ 1.53
PDE6BP35913 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDE6BP35913 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.62■■□□□ 1.53
PDE6BP35913 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC24.62■■□□□ 1.53
PDE6BP35913 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDE6BP35913 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDE6BP35913 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.62■■□□□ 1.53
PDE6BP35913 COPE-203ENST00000351079 907 ntTSL 2 BASIC24.62■■□□□ 1.53
PDE6BP35913 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
PDE6BP35913 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms