Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC124283.5-201ENST00000624661 1809 ntBASIC18.95■□□□□ 0.62
RORAP35398 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RORAP35398 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RORAP35398 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RORAP35398 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RORAP35398 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RORAP35398 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RORAP35398 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RORAP35398 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RORAP35398 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RORAP35398 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RORAP35398 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RORAP35398 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RORAP35398 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
RORAP35398 SNORA78-201ENST00000459373 127 ntBASIC18.94■□□□□ 0.62
RORAP35398 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.94■□□□□ 0.62
RORAP35398 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.94■□□□□ 0.62
RORAP35398 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RORAP35398 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.94■□□□□ 0.62
RORAP35398 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.94■□□□□ 0.62
RORAP35398 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RORAP35398 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RORAP35398 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RORAP35398 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RORAP35398 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RORAP35398 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RORAP35398 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.94■□□□□ 0.62
RORAP35398 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RORAP35398 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.94■□□□□ 0.62
RORAP35398 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RORAP35398 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RORAP35398 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RORAP35398 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.93■□□□□ 0.62
RORAP35398 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.93■□□□□ 0.62
RORAP35398 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.93■□□□□ 0.62
RORAP35398 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RORAP35398 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.93■□□□□ 0.62
RORAP35398 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RORAP35398 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RORAP35398 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.93■□□□□ 0.62
RORAP35398 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RORAP35398 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.93■□□□□ 0.62
RORAP35398 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RORAP35398 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RORAP35398 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RORAP35398 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RORAP35398 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RORAP35398 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RORAP35398 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RORAP35398 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RORAP35398 HLA-G-202ENST00000376815 851 ntBASIC18.92■□□□□ 0.62
RORAP35398 HLA-G-203ENST00000376818 1127 ntBASIC18.92■□□□□ 0.62
RORAP35398 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RORAP35398 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.92■□□□□ 0.62
RORAP35398 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.92■□□□□ 0.62
RORAP35398 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.92■□□□□ 0.62
RORAP35398 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.92■□□□□ 0.62
RORAP35398 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
RORAP35398 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RORAP35398 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.92■□□□□ 0.62
RORAP35398 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
RORAP35398 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RORAP35398 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.92■□□□□ 0.62
RORAP35398 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RORAP35398 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.91■□□□□ 0.62
RORAP35398 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.91■□□□□ 0.62
RORAP35398 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
RORAP35398 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RORAP35398 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RORAP35398 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.91■□□□□ 0.62
RORAP35398 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RORAP35398 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.91■□□□□ 0.62
RORAP35398 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RORAP35398 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.91■□□□□ 0.62
RORAP35398 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.91■□□□□ 0.62
RORAP35398 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.91■□□□□ 0.62
RORAP35398 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.91■□□□□ 0.62
RORAP35398 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RORAP35398 RARRES2P10-201ENST00000564312 460 ntBASIC18.91■□□□□ 0.62
RORAP35398 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.91■□□□□ 0.62
RORAP35398 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RORAP35398 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RORAP35398 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RORAP35398 AL031963.3-201ENST00000606441 850 ntBASIC18.91■□□□□ 0.62
RORAP35398 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.91■□□□□ 0.62
RORAP35398 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RORAP35398 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RORAP35398 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RORAP35398 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RORAP35398 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RORAP35398 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.91■□□□□ 0.62
RORAP35398 AL135905.2-201ENST00000584934 1404 ntBASIC18.91■□□□□ 0.62
RORAP35398 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RORAP35398 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RORAP35398 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RORAP35398 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RORAP35398 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.9■□□□□ 0.62
RORAP35398 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.9■□□□□ 0.62
RORAP35398 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RORAP35398 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms