Protein–RNA interactions for Protein: P32828

SLX5, E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX5, yeastyeast

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SLX5P32828 LAA1YJL207C 6045 nt2.18□□□□□ -2.06
SLX5P32828 SEC31YDL195W 3822 nt2.17□□□□□ -2.06
SLX5P32828 SEC16YPL085W 6588 nt2.11□□□□□ -2.07
SLX5P32828 SPT7YBR081C 3999 nt2.11□□□□□ -2.07
SLX5P32828 SOV1YMR066W 2697 nt2.11□□□□□ -2.07
SLX5P32828 USO1YDL058W 5373 nt2.1□□□□□ -2.07
SLX5P32828 NUP188YML103C 4968 nt2.09□□□□□ -2.08
SLX5P32828 MON2YNL297C 4911 nt2.07□□□□□ -2.08
SLX5P32828 YOR316C-AYOR316C-A 210 nt2.07□□□□□ -2.08
SLX5P32828 PMD1YER132C 5262 nt2.07□□□□□ -2.08
SLX5P32828 VAM6YDL077C 3150 nt2.06□□□□□ -2.08
SLX5P32828 YPR117WYPR117W 7470 nt2.06□□□□□ -2.08
SLX5P32828 SPP41YDR464W 4308 nt2.05□□□□□ -2.08
SLX5P32828 CDC39YCR093W 6327 nt2.04□□□□□ -2.08
SLX5P32828 YMR045CYMR045C 5268 nt2.03□□□□□ -2.09
SLX5P32828 YGR130CYGR130C 2451 nt2.02□□□□□ -2.09
SLX5P32828 BST1YFL025C 3090 nt2□□□□□ -2.09
SLX5P32828 SSK2YNR031C 4740 nt1.97□□□□□ -2.09
SLX5P32828 TOR2YKL203C 7425 nt1.95□□□□□ -2.1
SLX5P32828 SBH2YER019C-A 267 nt1.95□□□□□ -2.1
SLX5P32828 PEP1YBL017C 4740 nt1.92□□□□□ -2.1
SLX5P32828 CFT1YDR301W 4074 nt1.91□□□□□ -2.1
SLX5P32828 MYO1YHR023W 5787 nt1.91□□□□□ -2.1
SLX5P32828 FKS1YLR342W 5631 nt1.9□□□□□ -2.1
SLX5P32828 tT(UGU)HtT(UGU)H 72 nt1.88□□□□□ -2.11
SLX5P32828 TMA7YLR262C-A 195 nt1.87□□□□□ -2.11
SLX5P32828 YHR214C-BYHR214C-B 5382 nt1.84□□□□□ -2.11
SLX5P32828 YMR272W-BYMR272W-B 108 nt1.82□□□□□ -2.12
SLX5P32828 YMR247W-AYMR247W-A 144 nt1.81□□□□□ -2.12
SLX5P32828 YOR192C-BYOR192C-B 5313 nt1.81□□□□□ -2.12
SLX5P32828 FAB1YFR019W 6837 nt1.8□□□□□ -2.12
SLX5P32828 tC(GCA)QtC(GCA)Q 76 nt1.78□□□□□ -2.12
SLX5P32828 YOR093CYOR093C 4947 nt1.73□□□□□ -2.13
SLX5P32828 VPS15YBR097W 4365 nt1.71□□□□□ -2.14
SLX5P32828 IRA1YBR140C 9279 nt1.62□□□□□ -2.15
SLX5P32828 YBL100W-BYBL100W-B 5313 nt1.61□□□□□ -2.15
SLX5P32828 YML100W-AYML100W-A 174 nt1.59□□□□□ -2.15
SLX5P32828 RKR1YMR247C 4689 nt1.58□□□□□ -2.16
SLX5P32828 DNF3YMR162C 4971 nt1.57□□□□□ -2.16
SLX5P32828 MEC1YBR136W 7107 nt1.55□□□□□ -2.16
SLX5P32828 FIG2YCR089W 4830 nt1.54□□□□□ -2.16
SLX5P32828 LTE1YAL024C 4308 nt1.54□□□□□ -2.16
SLX5P32828 RPL41BYDL133C-A 78 nt1.54□□□□□ -2.16
SLX5P32828 BUD3YCL014W 4911 nt1.54□□□□□ -2.16
SLX5P32828 YOL014WYOL014W 375 nt1.53□□□□□ -2.16
SLX5P32828 BRR2YER172C 6492 nt1.53□□□□□ -2.16
SLX5P32828 YJR029WYJR029W 5268 nt1.52□□□□□ -2.17
SLX5P32828 YJL113WYJL113W 4647 nt1.52□□□□□ -2.17
SLX5P32828 tQ(UUG)E2tQ(UUG)E2 72 nt1.51□□□□□ -2.17
SLX5P32828 HKR1YDR420W 5409 nt1.51□□□□□ -2.17
SLX5P32828 PAU24YBR301W 363 nt1.48□□□□□ -2.17
SLX5P32828 YPR137C-BYPR137C-B 5268 nt1.45□□□□□ -2.18
SLX5P32828 CCH1YGR217W 6120 nt1.43□□□□□ -2.18
SLX5P32828 ESP1YGR098C 4893 nt1.43□□□□□ -2.18
SLX5P32828 YKL145W-AYKL145W-A 93 nt1.42□□□□□ -2.18
SLX5P32828 SCC2YDR180W 4482 nt1.37□□□□□ -2.19
SLX5P32828 tH(GUG)E1tH(GUG)E1 72 nt1.34□□□□□ -2.19
SLX5P32828 tH(GUG)E2tH(GUG)E2 72 nt1.34□□□□□ -2.19
SLX5P32828 tH(GUG)G1tH(GUG)G1 72 nt1.34□□□□□ -2.19
SLX5P32828 tH(GUG)G2tH(GUG)G2 72 nt1.34□□□□□ -2.19
SLX5P32828 tH(GUG)HtH(GUG)H 72 nt1.34□□□□□ -2.19
SLX5P32828 tH(GUG)KtH(GUG)K 72 nt1.34□□□□□ -2.19
SLX5P32828 tH(GUG)MtH(GUG)M 72 nt1.34□□□□□ -2.19
SLX5P32828 YOR335W-AYOR335W-A 81 nt1.34□□□□□ -2.19
SLX5P32828 snR58snR58 96 nt1.33□□□□□ -2.2
SLX5P32828 FMP27YLR454W 7887 nt1.3□□□□□ -2.2
SLX5P32828 IML1YJR138W 4755 nt1.28□□□□□ -2.2
SLX5P32828 MLP1YKR095W 5628 nt1.27□□□□□ -2.21
SLX5P32828 THO2YNL139C 4794 nt1.27□□□□□ -2.21
SLX5P32828 snR6snR6 112 nt1.27□□□□□ -2.21
SLX5P32828 DOP1YDR141C 5097 nt1.25□□□□□ -2.21
SLX5P32828 BEM2YER155C 6504 nt1.25□□□□□ -2.21
SLX5P32828 YOR186C-AYOR186C-A 210 nt1.22□□□□□ -2.21
SLX5P32828 tV(UAC)BtV(UAC)B 74 nt1.21□□□□□ -2.22
SLX5P32828 tV(UAC)DtV(UAC)D 74 nt1.21□□□□□ -2.22
SLX5P32828 IQG1YPL242C 4488 nt1.15□□□□□ -2.23
SLX5P32828 PAU9YBL108C-A 129 nt1.14□□□□□ -2.23
SLX5P32828 EMT1tM(CAU)D 73 nt1.06□□□□□ -2.24
SLX5P32828 EMT5tM(CAU)J1 73 nt1.06□□□□□ -2.24
SLX5P32828 EMT3tM(CAU)J2 73 nt1.06□□□□□ -2.24
SLX5P32828 EMT4tM(CAU)M 73 nt1.06□□□□□ -2.24
SLX5P32828 EMT2tM(CAU)O2 73 nt1.06□□□□□ -2.24
SLX5P32828 snR73snR73 106 nt1.05□□□□□ -2.24
SLX5P32828 YMR272W-AYMR272W-A 114 nt1.05□□□□□ -2.24
SLX5P32828 tF(GAA)BtF(GAA)B 73 nt0.95□□□□□ -2.26
SLX5P32828 tF(GAA)FtF(GAA)F 73 nt0.95□□□□□ -2.26
SLX5P32828 tF(GAA)GtF(GAA)G 73 nt0.95□□□□□ -2.26
SLX5P32828 tF(GAA)H1tF(GAA)H1 73 nt0.95□□□□□ -2.26
SLX5P32828 tF(GAA)H2tF(GAA)H2 73 nt0.95□□□□□ -2.26
SLX5P32828 tF(GAA)MtF(GAA)M 73 nt0.95□□□□□ -2.26
SLX5P32828 tF(GAA)P1tF(GAA)P1 73 nt0.95□□□□□ -2.26
SLX5P32828 tF(GAA)P2tF(GAA)P2 73 nt0.95□□□□□ -2.26
SLX5P32828 snR161snR161 161 nt0.92□□□□□ -2.26
SLX5P32828 UTP20YBL004W 7482 nt0.9□□□□□ -2.27
SLX5P32828 snR128snR128 126 nt0.85□□□□□ -2.27
SLX5P32828 tA(UGC)QtA(UGC)Q 76 nt0.82□□□□□ -2.28
SLX5P32828 UTP10YJL109C 5310 nt0.79□□□□□ -2.28
SLX5P32828 YPR159C-AYPR159C-A 102 nt0.73□□□□□ -2.29
SLX5P32828 tT(AGU)BtT(AGU)B 73 nt0.72□□□□□ -2.29
SLX5P32828 tT(AGU)CtT(AGU)C 73 nt0.72□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms