Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC8P31273 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.9■■□□□ 1.1
HOXC8P31273 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.9■■□□□ 1.1
HOXC8P31273 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC8P31273 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.9■■□□□ 1.1
HOXC8P31273 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HOXC8P31273 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
HOXC8P31273 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HOXC8P31273 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.89■■□□□ 1.09
HOXC8P31273 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HOXC8P31273 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HOXC8P31273 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.09
HOXC8P31273 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
HOXC8P31273 MIR1238-201ENST00000408483 83 ntBASIC21.89■■□□□ 1.09
HOXC8P31273 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.89■■□□□ 1.09
HOXC8P31273 KRT18P16-201ENST00000510337 1294 ntBASIC21.89■■□□□ 1.09
HOXC8P31273 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.89■■□□□ 1.09
HOXC8P31273 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HOXC8P31273 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HOXC8P31273 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HOXC8P31273 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.89■■□□□ 1.09
HOXC8P31273 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.89■■□□□ 1.09
HOXC8P31273 CYP2D8P-201ENST00000433633 1490 ntBASIC21.89■■□□□ 1.09
HOXC8P31273 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.88■■□□□ 1.09
HOXC8P31273 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HOXC8P31273 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.88■■□□□ 1.09
HOXC8P31273 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HOXC8P31273 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HOXC8P31273 TMPOP1-202ENST00000424642 1267 ntBASIC21.88■■□□□ 1.09
HOXC8P31273 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.88■■□□□ 1.09
HOXC8P31273 YBX1P10-201ENST00000444752 975 ntBASIC21.88■■□□□ 1.09
HOXC8P31273 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.88■■□□□ 1.09
HOXC8P31273 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.88■■□□□ 1.09
HOXC8P31273 AC010947.1-201ENST00000623454 693 ntBASIC21.88■■□□□ 1.09
HOXC8P31273 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HOXC8P31273 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
HOXC8P31273 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.87■■□□□ 1.09
HOXC8P31273 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
HOXC8P31273 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
HOXC8P31273 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 AL390955.1-201ENST00000428694 934 ntBASIC21.87■■□□□ 1.09
HOXC8P31273 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.87■■□□□ 1.09
HOXC8P31273 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
HOXC8P31273 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
HOXC8P31273 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.87■■□□□ 1.09
HOXC8P31273 AC092865.7-201ENST00000641832 219 ntBASIC21.87■■□□□ 1.09
HOXC8P31273 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 AC018553.1-201ENST00000616682 1458 ntBASIC21.87■■□□□ 1.09
HOXC8P31273 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HOXC8P31273 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.87■■□□□ 1.09
HOXC8P31273 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC8P31273 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC8P31273 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
HOXC8P31273 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC8P31273 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
HOXC8P31273 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC8P31273 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC8P31273 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
HOXC8P31273 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.86■■□□□ 1.09
HOXC8P31273 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.86■■□□□ 1.09
HOXC8P31273 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.86■■□□□ 1.09
HOXC8P31273 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
HOXC8P31273 AL031985.4-201ENST00000642138 673 ntBASIC21.86■■□□□ 1.09
HOXC8P31273 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC8P31273 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
HOXC8P31273 KRT16P6-202ENST00000425692 1426 ntBASIC21.86■■□□□ 1.09
HOXC8P31273 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC8P31273 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.86■■□□□ 1.09
HOXC8P31273 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC8P31273 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC8P31273 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HOXC8P31273 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HOXC8P31273 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.85■■□□□ 1.09
HOXC8P31273 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HOXC8P31273 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
HOXC8P31273 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.85■■□□□ 1.09
HOXC8P31273 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
HOXC8P31273 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.85■■□□□ 1.09
HOXC8P31273 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.85■■□□□ 1.09
HOXC8P31273 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.85■■□□□ 1.09
HOXC8P31273 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.85■■□□□ 1.09
HOXC8P31273 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.85■■□□□ 1.09
HOXC8P31273 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.85■■□□□ 1.09
HOXC8P31273 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HOXC8P31273 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.85■■□□□ 1.09
HOXC8P31273 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HOXC8P31273 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HOXC8P31273 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms