Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHATP28329 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.97■□□□□ 0.31
CHATP28329 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHATP28329 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHATP28329 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CHATP28329 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHATP28329 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHATP28329 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.96■□□□□ 0.31
CHATP28329 AC087633.2-202ENST00000565166 1439 ntBASIC16.96■□□□□ 0.31
CHATP28329 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHATP28329 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHATP28329 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHATP28329 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CHATP28329 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHATP28329 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHATP28329 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHATP28329 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHATP28329 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CHATP28329 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHATP28329 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHATP28329 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
CHATP28329 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHATP28329 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.96■□□□□ 0.31
CHATP28329 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.96■□□□□ 0.31
CHATP28329 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHATP28329 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHATP28329 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.96■□□□□ 0.31
CHATP28329 AL356652.1-201ENST00000615962 565 ntBASIC16.96■□□□□ 0.31
CHATP28329 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.96■□□□□ 0.31
CHATP28329 MYCNOS-205ENST00000641950 531 ntBASIC16.96■□□□□ 0.31
CHATP28329 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHATP28329 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHATP28329 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHATP28329 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.96■□□□□ 0.31
CHATP28329 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.96■□□□□ 0.31
CHATP28329 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CHATP28329 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHATP28329 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
CHATP28329 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
CHATP28329 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHATP28329 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.96■□□□□ 0.3
CHATP28329 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CHATP28329 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CHATP28329 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHATP28329 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CHATP28329 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.95■□□□□ 0.3
CHATP28329 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHATP28329 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHATP28329 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHATP28329 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
CHATP28329 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.95■□□□□ 0.3
CHATP28329 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHATP28329 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
CHATP28329 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CHATP28329 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.95■□□□□ 0.3
CHATP28329 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.95■□□□□ 0.3
CHATP28329 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CHATP28329 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHATP28329 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.95■□□□□ 0.3
CHATP28329 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHATP28329 MIR6821-201ENST00000617625 74 ntBASIC16.95■□□□□ 0.3
CHATP28329 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.95■□□□□ 0.3
CHATP28329 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHATP28329 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHATP28329 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHATP28329 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHATP28329 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CHATP28329 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.95■□□□□ 0.3
CHATP28329 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHATP28329 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CHATP28329 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHATP28329 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CHATP28329 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CHATP28329 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHATP28329 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHATP28329 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.94■□□□□ 0.3
CHATP28329 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.94■□□□□ 0.3
CHATP28329 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHATP28329 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHATP28329 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.94■□□□□ 0.3
CHATP28329 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CHATP28329 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHATP28329 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.94■□□□□ 0.3
CHATP28329 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHATP28329 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms