Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
GDF1P27539 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.09■□□□□ 0.49
GDF1P27539 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDF1P27539 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDF1P27539 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDF1P27539 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.09■□□□□ 0.49
GDF1P27539 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
GDF1P27539 SMG8-203ENST00000578922 2178 ntBASIC18.09■□□□□ 0.49
GDF1P27539 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GDF1P27539 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.09■□□□□ 0.49
GDF1P27539 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDF1P27539 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
GDF1P27539 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.09■□□□□ 0.49
GDF1P27539 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDF1P27539 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.09■□□□□ 0.49
GDF1P27539 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.09■□□□□ 0.49
GDF1P27539 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.09■□□□□ 0.49
GDF1P27539 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.09■□□□□ 0.49
GDF1P27539 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.09■□□□□ 0.49
GDF1P27539 AC124016.1-201ENST00000609552 612 ntBASIC18.09■□□□□ 0.49
GDF1P27539 AL121829.2-201ENST00000620908 328 ntBASIC18.09■□□□□ 0.49
GDF1P27539 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDF1P27539 KRT16P6-202ENST00000425692 1426 ntBASIC18.08■□□□□ 0.49
GDF1P27539 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.08■□□□□ 0.49
GDF1P27539 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.08■□□□□ 0.49
GDF1P27539 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GDF1P27539 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.08■□□□□ 0.48
GDF1P27539 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
GDF1P27539 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
GDF1P27539 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.08■□□□□ 0.48
GDF1P27539 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
GDF1P27539 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.08■□□□□ 0.48
GDF1P27539 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.08■□□□□ 0.48
GDF1P27539 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.08■□□□□ 0.48
GDF1P27539 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
GDF1P27539 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.08■□□□□ 0.48
GDF1P27539 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GDF1P27539 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GDF1P27539 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.07■□□□□ 0.48
GDF1P27539 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
GDF1P27539 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GDF1P27539 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDF1P27539 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDF1P27539 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GDF1P27539 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GDF1P27539 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDF1P27539 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.07■□□□□ 0.48
GDF1P27539 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.07■□□□□ 0.48
GDF1P27539 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.07■□□□□ 0.48
GDF1P27539 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.07■□□□□ 0.48
GDF1P27539 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GDF1P27539 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.07■□□□□ 0.48
GDF1P27539 AC110285.5-201ENST00000611501 352 ntBASIC18.07■□□□□ 0.48
GDF1P27539 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
GDF1P27539 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.07■□□□□ 0.48
GDF1P27539 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GDF1P27539 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.07■□□□□ 0.48
GDF1P27539 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDF1P27539 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GDF1P27539 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDF1P27539 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GDF1P27539 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GDF1P27539 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDF1P27539 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.06■□□□□ 0.48
GDF1P27539 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.06■□□□□ 0.48
GDF1P27539 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
GDF1P27539 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.06■□□□□ 0.48
GDF1P27539 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GDF1P27539 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.06■□□□□ 0.48
GDF1P27539 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.06■□□□□ 0.48
GDF1P27539 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDF1P27539 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDF1P27539 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDF1P27539 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDF1P27539 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.06■□□□□ 0.48
GDF1P27539 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDF1P27539 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.06■□□□□ 0.48
GDF1P27539 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.06■□□□□ 0.48
GDF1P27539 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
GDF1P27539 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.06■□□□□ 0.48
GDF1P27539 AC133681.1-201ENST00000465482 601 ntBASIC18.06■□□□□ 0.48
GDF1P27539 RPS2P4-201ENST00000476944 856 ntBASIC18.06■□□□□ 0.48
GDF1P27539 AC008550.1-201ENST00000511500 884 ntBASIC18.06■□□□□ 0.48
GDF1P27539 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.06■□□□□ 0.48
GDF1P27539 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.06■□□□□ 0.48
GDF1P27539 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDF1P27539 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
GDF1P27539 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.06■□□□□ 0.48
GDF1P27539 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GDF1P27539 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.06■□□□□ 0.48
GDF1P27539 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.06■□□□□ 0.48
GDF1P27539 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GDF1P27539 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.06■□□□□ 0.48
GDF1P27539 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.05■□□□□ 0.48
GDF1P27539 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF1P27539 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms