Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HIST1H1DP16402 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST1H1DP16402 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST1H1DP16402 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HIST1H1DP16402 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.9■□□□□ 0.3
HIST1H1DP16402 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.9■□□□□ 0.3
HIST1H1DP16402 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H1DP16402 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.89■□□□□ 0.3
HIST1H1DP16402 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HIST1H1DP16402 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H1DP16402 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H1DP16402 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H1DP16402 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.89■□□□□ 0.29
HIST1H1DP16402 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.89■□□□□ 0.29
HIST1H1DP16402 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H1DP16402 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
HIST1H1DP16402 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H1DP16402 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.89■□□□□ 0.29
HIST1H1DP16402 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.89■□□□□ 0.29
HIST1H1DP16402 TERF1P2-201ENST00000583350 1212 ntBASIC16.89■□□□□ 0.29
HIST1H1DP16402 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HIST1H1DP16402 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HIST1H1DP16402 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.89■□□□□ 0.29
HIST1H1DP16402 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H1DP16402 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HIST1H1DP16402 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H1DP16402 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H1DP16402 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HIST1H1DP16402 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1DP16402 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.88■□□□□ 0.29
HIST1H1DP16402 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1DP16402 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1DP16402 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1DP16402 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
HIST1H1DP16402 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1DP16402 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.88■□□□□ 0.29
HIST1H1DP16402 AC123595.1-201ENST00000440769 1046 ntBASIC16.88■□□□□ 0.29
HIST1H1DP16402 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.88■□□□□ 0.29
HIST1H1DP16402 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
HIST1H1DP16402 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.88■□□□□ 0.29
HIST1H1DP16402 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1DP16402 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1DP16402 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1DP16402 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H1DP16402 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HIST1H1DP16402 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.87■□□□□ 0.29
HIST1H1DP16402 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 AL139246.5-201ENST00000606645 996 ntBASIC16.87■□□□□ 0.29
HIST1H1DP16402 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HIST1H1DP16402 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H1DP16402 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms