Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.39■□□□□ 0.69
PCNAP12004 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCNAP12004 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCNAP12004 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCNAP12004 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.39■□□□□ 0.69
PCNAP12004 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCNAP12004 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCNAP12004 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCNAP12004 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.39■□□□□ 0.69
PCNAP12004 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.39■□□□□ 0.69
PCNAP12004 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCNAP12004 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCNAP12004 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCNAP12004 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCNAP12004 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCNAP12004 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.39■□□□□ 0.69
PCNAP12004 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCNAP12004 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PCNAP12004 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCNAP12004 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCNAP12004 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCNAP12004 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCNAP12004 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCNAP12004 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCNAP12004 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.38■□□□□ 0.69
PCNAP12004 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.38■□□□□ 0.69
PCNAP12004 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.38■□□□□ 0.69
PCNAP12004 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.38■□□□□ 0.69
PCNAP12004 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.38■□□□□ 0.69
PCNAP12004 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCNAP12004 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCNAP12004 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
PCNAP12004 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.37■□□□□ 0.69
PCNAP12004 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCNAP12004 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.37■□□□□ 0.69
PCNAP12004 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCNAP12004 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCNAP12004 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.37■□□□□ 0.69
PCNAP12004 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCNAP12004 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCNAP12004 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCNAP12004 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCNAP12004 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.37■□□□□ 0.69
PCNAP12004 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCNAP12004 AC105036.2-201ENST00000569468 176 ntBASIC19.37■□□□□ 0.69
PCNAP12004 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.37■□□□□ 0.69
PCNAP12004 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PCNAP12004 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCNAP12004 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PCNAP12004 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCNAP12004 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.37■□□□□ 0.69
PCNAP12004 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.36■□□□□ 0.69
PCNAP12004 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PCNAP12004 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PCNAP12004 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCNAP12004 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.36■□□□□ 0.69
PCNAP12004 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCNAP12004 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.36■□□□□ 0.69
PCNAP12004 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.36■□□□□ 0.69
PCNAP12004 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.36■□□□□ 0.69
PCNAP12004 AL589743.5-201ENST00000616611 1050 ntBASIC19.36■□□□□ 0.69
PCNAP12004 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCNAP12004 AL050303.2-201ENST00000619798 666 ntBASIC19.36■□□□□ 0.69
PCNAP12004 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.36■□□□□ 0.69
PCNAP12004 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PCNAP12004 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PCNAP12004 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.36■□□□□ 0.69
PCNAP12004 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCNAP12004 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PCNAP12004 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PCNAP12004 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCNAP12004 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCNAP12004 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCNAP12004 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCNAP12004 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.35■□□□□ 0.69
PCNAP12004 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCNAP12004 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCNAP12004 AC138932.1-201ENST00000534164 6830 ntBASIC19.35■□□□□ 0.69
PCNAP12004 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PCNAP12004 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCNAP12004 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCNAP12004 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCNAP12004 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.35■□□□□ 0.69
PCNAP12004 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCNAP12004 AL512625.2-201ENST00000417533 625 ntBASIC19.35■□□□□ 0.69
PCNAP12004 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.35■□□□□ 0.69
PCNAP12004 AC006970.2-201ENST00000450065 779 ntBASIC19.35■□□□□ 0.69
PCNAP12004 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.35■□□□□ 0.69
PCNAP12004 AF201337.1-201ENST00000520239 748 ntBASIC19.35■□□□□ 0.69
PCNAP12004 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.35■□□□□ 0.69
PCNAP12004 AC092666.2-201ENST00000613287 246 ntBASIC19.35■□□□□ 0.69
PCNAP12004 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCNAP12004 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.35■□□□□ 0.69
PCNAP12004 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCNAP12004 KRT17P1-201ENST00000399211 1546 ntBASIC19.35■□□□□ 0.69
PCNAP12004 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCNAP12004 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCNAP12004 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCNAP12004 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCNAP12004 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms