Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP2P08253 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.12■□□□□ 0.81
MMP2P08253 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP2P08253 UNC93B5-201ENST00000530315 699 ntBASIC20.12■□□□□ 0.81
MMP2P08253 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
MMP2P08253 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.12■□□□□ 0.81
MMP2P08253 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP2P08253 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP2P08253 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP2P08253 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP2P08253 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP2P08253 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP2P08253 AFG3L1P-217ENST00000557444 2447 ntBASIC20.12■□□□□ 0.81
MMP2P08253 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
MMP2P08253 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP2P08253 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.11■□□□□ 0.81
MMP2P08253 AC124283.5-201ENST00000624661 1809 ntBASIC20.11■□□□□ 0.81
MMP2P08253 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP2P08253 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP2P08253 SLC25A24-204ENST00000569674 2357 ntBASIC20.11■□□□□ 0.81
MMP2P08253 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP2P08253 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP2P08253 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.11■□□□□ 0.81
MMP2P08253 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.11■□□□□ 0.81
MMP2P08253 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.11■□□□□ 0.81
MMP2P08253 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.11■□□□□ 0.81
MMP2P08253 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP2P08253 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.11■□□□□ 0.81
MMP2P08253 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.11■□□□□ 0.81
MMP2P08253 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.11■□□□□ 0.81
MMP2P08253 SOX15-203ENST00000570788 1093 ntBASIC20.11■□□□□ 0.81
MMP2P08253 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP2P08253 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.11■□□□□ 0.81
MMP2P08253 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.11■□□□□ 0.81
MMP2P08253 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP2P08253 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP2P08253 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.1■□□□□ 0.81
MMP2P08253 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
MMP2P08253 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
MMP2P08253 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 RNA5SP413-201ENST00000516373 109 ntBASIC20.1■□□□□ 0.81
MMP2P08253 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.1■□□□□ 0.81
MMP2P08253 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP2P08253 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
MMP2P08253 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP2P08253 PHGDH-210ENST00000641115 1638 ntBASIC20.09■□□□□ 0.81
MMP2P08253 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.09■□□□□ 0.81
MMP2P08253 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP2P08253 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
MMP2P08253 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP2P08253 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.09■□□□□ 0.81
MMP2P08253 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP2P08253 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.09■□□□□ 0.81
MMP2P08253 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
MMP2P08253 AC008403.3-201ENST00000598924 454 ntBASIC20.09■□□□□ 0.81
MMP2P08253 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.09■□□□□ 0.81
MMP2P08253 AC125437.2-201ENST00000625180 2167 ntBASIC20.09■□□□□ 0.81
MMP2P08253 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP2P08253 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP2P08253 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
MMP2P08253 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP2P08253 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
MMP2P08253 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP2P08253 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP2P08253 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP2P08253 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP2P08253 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP2P08253 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP2P08253 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
MMP2P08253 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.08■□□□□ 0.81
MMP2P08253 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
MMP2P08253 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
MMP2P08253 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.08■□□□□ 0.81
MMP2P08253 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
MMP2P08253 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.08■□□□□ 0.81
MMP2P08253 UNC93B4-201ENST00000505679 747 ntBASIC20.08■□□□□ 0.81
MMP2P08253 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.08■□□□□ 0.81
MMP2P08253 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
MMP2P08253 TMEM179-206ENST00000616017 1645 ntBASIC20.08■□□□□ 0.8
MMP2P08253 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MMP2P08253 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MMP2P08253 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.07■□□□□ 0.8
MMP2P08253 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
MMP2P08253 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MMP2P08253 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
MMP2P08253 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms