Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NEFMP07197 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
NEFMP07197 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NEFMP07197 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC26.59■■□□□ 1.85
NEFMP07197 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC26.59■■□□□ 1.85
NEFMP07197 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
NEFMP07197 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
NEFMP07197 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
NEFMP07197 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.59■■□□□ 1.85
NEFMP07197 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC26.59■■□□□ 1.85
NEFMP07197 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NEFMP07197 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
NEFMP07197 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
NEFMP07197 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.59■■□□□ 1.85
NEFMP07197 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
NEFMP07197 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.59■■□□□ 1.85
NEFMP07197 DPP3P2-201ENST00000416030 1696 ntBASIC26.59■■□□□ 1.85
NEFMP07197 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
NEFMP07197 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
NEFMP07197 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NEFMP07197 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NEFMP07197 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
NEFMP07197 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC26.58■■□□□ 1.85
NEFMP07197 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC26.58■■□□□ 1.85
NEFMP07197 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
NEFMP07197 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
NEFMP07197 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
NEFMP07197 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
NEFMP07197 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
NEFMP07197 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NEFMP07197 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC26.58■■□□□ 1.85
NEFMP07197 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC26.58■■□□□ 1.85
NEFMP07197 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC26.58■■□□□ 1.84
NEFMP07197 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NEFMP07197 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
NEFMP07197 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NEFMP07197 KRT8P20-201ENST00000423953 1409 ntBASIC26.57■■□□□ 1.84
NEFMP07197 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NEFMP07197 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
NEFMP07197 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC26.57■■□□□ 1.84
NEFMP07197 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
NEFMP07197 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NEFMP07197 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NEFMP07197 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.57■■□□□ 1.84
NEFMP07197 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
NEFMP07197 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NEFMP07197 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
NEFMP07197 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NEFMP07197 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NEFMP07197 AL157384.1-201ENST00000445995 2473 ntBASIC26.57■■□□□ 1.84
NEFMP07197 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC26.57■■□□□ 1.84
NEFMP07197 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
NEFMP07197 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
NEFMP07197 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC26.56■■□□□ 1.84
NEFMP07197 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
NEFMP07197 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC26.56■■□□□ 1.84
NEFMP07197 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NEFMP07197 POM121L13P-201ENST00000422362 380 ntBASIC26.56■■□□□ 1.84
NEFMP07197 AC128676.1-201ENST00000454392 318 ntBASIC26.56■■□□□ 1.84
NEFMP07197 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC26.56■■□□□ 1.84
NEFMP07197 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC26.56■■□□□ 1.84
NEFMP07197 AL031963.3-201ENST00000606441 850 ntBASIC26.56■■□□□ 1.84
NEFMP07197 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NEFMP07197 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC26.55■■□□□ 1.84
NEFMP07197 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NEFMP07197 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC26.55■■□□□ 1.84
NEFMP07197 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NEFMP07197 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NEFMP07197 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.55■■□□□ 1.84
NEFMP07197 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.55■■□□□ 1.84
NEFMP07197 AC120498.8-201ENST00000614275 531 ntBASIC26.55■■□□□ 1.84
NEFMP07197 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
NEFMP07197 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NEFMP07197 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
NEFMP07197 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NEFMP07197 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
NEFMP07197 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NEFMP07197 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
NEFMP07197 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NEFMP07197 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NEFMP07197 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NEFMP07197 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NEFMP07197 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NEFMP07197 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.54■■□□□ 1.84
NEFMP07197 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NEFMP07197 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
NEFMP07197 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
NEFMP07197 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC26.54■■□□□ 1.84
NEFMP07197 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.54■■□□□ 1.84
NEFMP07197 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC26.53■■□□□ 1.84
NEFMP07197 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC26.53■■□□□ 1.84
NEFMP07197 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
NEFMP07197 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NEFMP07197 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC26.53■■□□□ 1.84
NEFMP07197 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC26.53■■□□□ 1.84
NEFMP07197 AC073648.6-201ENST00000641589 218 ntBASIC26.53■■□□□ 1.84
NEFMP07197 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
NEFMP07197 KRT8P17-201ENST00000453110 1448 ntBASIC26.53■■□□□ 1.84
NEFMP07197 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
NEFMP07197 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms