Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.97■□□□□ 0.79
APOA4P06727 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOA4P06727 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.97■□□□□ 0.79
APOA4P06727 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
APOA4P06727 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
APOA4P06727 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOA4P06727 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOA4P06727 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOA4P06727 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOA4P06727 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOA4P06727 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.97■□□□□ 0.79
APOA4P06727 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
APOA4P06727 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
APOA4P06727 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
APOA4P06727 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
APOA4P06727 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
APOA4P06727 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
APOA4P06727 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
APOA4P06727 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.96■□□□□ 0.79
APOA4P06727 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
APOA4P06727 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.96■□□□□ 0.79
APOA4P06727 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.96■□□□□ 0.79
APOA4P06727 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
APOA4P06727 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.96■□□□□ 0.79
APOA4P06727 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
APOA4P06727 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
APOA4P06727 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
APOA4P06727 AL355472.2-201ENST00000422958 438 ntBASIC19.96■□□□□ 0.79
APOA4P06727 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.96■□□□□ 0.79
APOA4P06727 AC083906.2-201ENST00000511578 360 ntBASIC19.96■□□□□ 0.79
APOA4P06727 AC090192.1-201ENST00000517740 490 ntBASIC19.96■□□□□ 0.79
APOA4P06727 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.96■□□□□ 0.79
APOA4P06727 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.96■□□□□ 0.79
APOA4P06727 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.96■□□□□ 0.79
APOA4P06727 AL589743.5-201ENST00000616611 1050 ntBASIC19.96■□□□□ 0.79
APOA4P06727 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.96■□□□□ 0.79
APOA4P06727 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.96■□□□□ 0.79
APOA4P06727 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
APOA4P06727 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
APOA4P06727 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
APOA4P06727 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
APOA4P06727 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
APOA4P06727 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
APOA4P06727 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
APOA4P06727 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
APOA4P06727 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
APOA4P06727 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.95■□□□□ 0.78
APOA4P06727 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
APOA4P06727 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOA4P06727 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.95■□□□□ 0.78
APOA4P06727 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.95■□□□□ 0.78
APOA4P06727 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
APOA4P06727 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
APOA4P06727 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOA4P06727 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOA4P06727 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
APOA4P06727 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
APOA4P06727 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.95■□□□□ 0.78
APOA4P06727 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.95■□□□□ 0.78
APOA4P06727 NCF1B-203ENST00000435988 1254 ntBASIC19.95■□□□□ 0.78
APOA4P06727 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.95■□□□□ 0.78
APOA4P06727 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.95■□□□□ 0.78
APOA4P06727 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.95■□□□□ 0.78
APOA4P06727 AC105020.6-201ENST00000621523 1217 ntBASIC19.95■□□□□ 0.78
APOA4P06727 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOA4P06727 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.95■□□□□ 0.78
APOA4P06727 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOA4P06727 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOA4P06727 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.95■□□□□ 0.78
APOA4P06727 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOA4P06727 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOA4P06727 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
APOA4P06727 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
APOA4P06727 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOA4P06727 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.94■□□□□ 0.78
APOA4P06727 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOA4P06727 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.94■□□□□ 0.78
APOA4P06727 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOA4P06727 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
APOA4P06727 GPX1P1-201ENST00000388829 606 ntBASIC19.94■□□□□ 0.78
APOA4P06727 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.94■□□□□ 0.78
APOA4P06727 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.94■□□□□ 0.78
APOA4P06727 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.94■□□□□ 0.78
APOA4P06727 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.94■□□□□ 0.78
APOA4P06727 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
APOA4P06727 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
APOA4P06727 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
APOA4P06727 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
APOA4P06727 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOA4P06727 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
APOA4P06727 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
APOA4P06727 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOA4P06727 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOA4P06727 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOA4P06727 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
APOA4P06727 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.93■□□□□ 0.78
APOA4P06727 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
APOA4P06727 BX119927.1-201ENST00000636596 1552 ntBASIC19.93■□□□□ 0.78
APOA4P06727 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
APOA4P06727 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms