Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CAPNS1P04632 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CAPNS1P04632 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CAPNS1P04632 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.82■□□□□ 0.76
CAPNS1P04632 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CAPNS1P04632 POM121L13P-201ENST00000422362 380 ntBASIC19.82■□□□□ 0.76
CAPNS1P04632 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
CAPNS1P04632 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CAPNS1P04632 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPNS1P04632 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPNS1P04632 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.82■□□□□ 0.76
CAPNS1P04632 AL355075.4-201ENST00000554988 638 ntBASIC19.82■□□□□ 0.76
CAPNS1P04632 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.82■□□□□ 0.76
CAPNS1P04632 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
CAPNS1P04632 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CAPNS1P04632 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.82■□□□□ 0.76
CAPNS1P04632 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPNS1P04632 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPNS1P04632 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CAPNS1P04632 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CAPNS1P04632 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPNS1P04632 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CAPNS1P04632 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPNS1P04632 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPNS1P04632 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPNS1P04632 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPNS1P04632 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CAPNS1P04632 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPNS1P04632 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CAPNS1P04632 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.81■□□□□ 0.76
CAPNS1P04632 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.81■□□□□ 0.76
CAPNS1P04632 AC133681.1-201ENST00000465482 601 ntBASIC19.81■□□□□ 0.76
CAPNS1P04632 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.81■□□□□ 0.76
CAPNS1P04632 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPNS1P04632 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPNS1P04632 SOX15-203ENST00000570788 1093 ntBASIC19.81■□□□□ 0.76
CAPNS1P04632 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CAPNS1P04632 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPNS1P04632 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPNS1P04632 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPNS1P04632 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPNS1P04632 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
CAPNS1P04632 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
CAPNS1P04632 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CAPNS1P04632 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.81■□□□□ 0.76
CAPNS1P04632 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
CAPNS1P04632 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CAPNS1P04632 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPNS1P04632 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CAPNS1P04632 BX323043.1-201ENST00000641006 1765 ntBASIC19.8■□□□□ 0.76
CAPNS1P04632 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CAPNS1P04632 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPNS1P04632 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CAPNS1P04632 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPNS1P04632 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPNS1P04632 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CAPNS1P04632 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPNS1P04632 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPNS1P04632 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPNS1P04632 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPNS1P04632 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPNS1P04632 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.8■□□□□ 0.76
CAPNS1P04632 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CAPNS1P04632 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.8■□□□□ 0.76
CAPNS1P04632 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.8■□□□□ 0.76
CAPNS1P04632 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.8■□□□□ 0.76
CAPNS1P04632 AP001412.1-201ENST00000608405 714 ntBASIC19.8■□□□□ 0.76
CAPNS1P04632 AL353708.3-201ENST00000610272 989 ntBASIC19.8■□□□□ 0.76
CAPNS1P04632 AC113410.3-201ENST00000623366 203 ntBASIC19.8■□□□□ 0.76
CAPNS1P04632 AL590326.2-201ENST00000625139 305 ntBASIC19.8■□□□□ 0.76
CAPNS1P04632 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.8■□□□□ 0.76
CAPNS1P04632 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CAPNS1P04632 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CAPNS1P04632 AL162377.1-201ENST00000618844 1793 ntBASIC19.8■□□□□ 0.76
CAPNS1P04632 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CAPNS1P04632 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.79■□□□□ 0.76
CAPNS1P04632 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CAPNS1P04632 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPNS1P04632 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPNS1P04632 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPNS1P04632 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CAPNS1P04632 SMG8-203ENST00000578922 2178 ntBASIC19.79■□□□□ 0.76
CAPNS1P04632 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPNS1P04632 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPNS1P04632 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPNS1P04632 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.79■□□□□ 0.76
CAPNS1P04632 AL034346.1-201ENST00000568244 1277 ntBASIC19.79■□□□□ 0.76
CAPNS1P04632 FAM21FP-204ENST00000608637 956 ntBASIC19.79■□□□□ 0.76
CAPNS1P04632 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPNS1P04632 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.79■□□□□ 0.76
CAPNS1P04632 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CAPNS1P04632 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CAPNS1P04632 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.78■□□□□ 0.76
CAPNS1P04632 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPNS1P04632 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPNS1P04632 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.78■□□□□ 0.76
CAPNS1P04632 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPNS1P04632 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPNS1P04632 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CAPNS1P04632 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms