Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.64■□□□□ 0.57
PDGFAP04085 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFAP04085 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFAP04085 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.64■□□□□ 0.57
PDGFAP04085 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.64■□□□□ 0.57
PDGFAP04085 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFAP04085 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.64■□□□□ 0.57
PDGFAP04085 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFAP04085 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFAP04085 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFAP04085 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFAP04085 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFAP04085 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDGFAP04085 FBXW4P1-201ENST00000426721 2239 ntBASIC18.64■□□□□ 0.57
PDGFAP04085 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.63■□□□□ 0.57
PDGFAP04085 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.63■□□□□ 0.57
PDGFAP04085 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFAP04085 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PDGFAP04085 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFAP04085 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.63■□□□□ 0.57
PDGFAP04085 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.63■□□□□ 0.57
PDGFAP04085 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.63■□□□□ 0.57
PDGFAP04085 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.63■□□□□ 0.57
PDGFAP04085 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.63■□□□□ 0.57
PDGFAP04085 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFAP04085 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFAP04085 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFAP04085 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFAP04085 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFAP04085 AC026310.3-201ENST00000625186 2373 ntBASIC18.63■□□□□ 0.57
PDGFAP04085 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFAP04085 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFAP04085 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDGFAP04085 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PDGFAP04085 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFAP04085 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PDGFAP04085 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFAP04085 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFAP04085 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFAP04085 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFAP04085 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFAP04085 PGM5P4-201ENST00000421970 445 ntBASIC18.62■□□□□ 0.57
PDGFAP04085 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PDGFAP04085 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.62■□□□□ 0.57
PDGFAP04085 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.62■□□□□ 0.57
PDGFAP04085 AC026471.5-201ENST00000615068 467 ntBASIC18.62■□□□□ 0.57
PDGFAP04085 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PDGFAP04085 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFAP04085 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFAP04085 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFAP04085 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFAP04085 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.62■□□□□ 0.57
PDGFAP04085 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFAP04085 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.62■□□□□ 0.57
PDGFAP04085 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PDGFAP04085 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PDGFAP04085 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFAP04085 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDGFAP04085 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PDGFAP04085 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFAP04085 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PDGFAP04085 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.61■□□□□ 0.57
PDGFAP04085 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.61■□□□□ 0.57
PDGFAP04085 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.61■□□□□ 0.57
PDGFAP04085 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFAP04085 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.61■□□□□ 0.57
PDGFAP04085 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFAP04085 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFAP04085 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFAP04085 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFAP04085 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFAP04085 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.61■□□□□ 0.57
PDGFAP04085 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.61■□□□□ 0.57
PDGFAP04085 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.61■□□□□ 0.57
PDGFAP04085 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.61■□□□□ 0.57
PDGFAP04085 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
PDGFAP04085 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFAP04085 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFAP04085 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFAP04085 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.61■□□□□ 0.57
PDGFAP04085 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFAP04085 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDGFAP04085 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFAP04085 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFAP04085 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFAP04085 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFAP04085 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.6■□□□□ 0.57
PDGFAP04085 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFAP04085 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFAP04085 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFAP04085 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFAP04085 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDGFAP04085 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.6■□□□□ 0.57
PDGFAP04085 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.6■□□□□ 0.57
PDGFAP04085 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PDGFAP04085 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PDGFAP04085 AP003071.4-201ENST00000562276 1284 ntBASIC18.6■□□□□ 0.57
PDGFAP04085 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.6■□□□□ 0.57
PDGFAP04085 AL445228.2-201ENST00000605589 952 ntBASIC18.6■□□□□ 0.57
PDGFAP04085 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms