Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC024257.2-201ENST00000549699 147 ntBASIC17.22■□□□□ 0.35
HLA-DQB1P01920 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DQB1P01920 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 NOC2LP2-201ENST00000407594 1944 ntBASIC17.21■□□□□ 0.35
HLA-DQB1P01920 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 AL136162.1-201ENST00000607711 1078 ntBASIC17.21■□□□□ 0.35
HLA-DQB1P01920 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-DQB1P01920 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQB1P01920 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQB1P01920 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQB1P01920 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-DQB1P01920 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-DQB1P01920 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 POU5F1P4-201ENST00000413175 1085 ntBASIC17.19■□□□□ 0.34
HLA-DQB1P01920 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 AC105233.4-201ENST00000642045 216 ntBASIC17.19■□□□□ 0.34
HLA-DQB1P01920 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 AC116050.2-201ENST00000612102 1779 ntBASIC17.19■□□□□ 0.34
HLA-DQB1P01920 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 AC135279.3-201ENST00000610945 1311 ntBASIC17.19■□□□□ 0.34
HLA-DQB1P01920 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
HLA-DQB1P01920 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 AL133373.2-201ENST00000623187 2828 ntBASIC17.18■□□□□ 0.34
HLA-DQB1P01920 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HLA-DQB1P01920 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms