Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TIMP1P01033 KRT18P48-201ENST00000434763 852 ntBASIC21.7■■□□□ 1.06
TIMP1P01033 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TIMP1P01033 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.7■■□□□ 1.06
TIMP1P01033 AP000692.2-201ENST00000608391 879 ntBASIC21.7■■□□□ 1.06
TIMP1P01033 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.7■■□□□ 1.06
TIMP1P01033 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TIMP1P01033 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TIMP1P01033 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TIMP1P01033 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TIMP1P01033 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
TIMP1P01033 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TIMP1P01033 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TIMP1P01033 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.69■■□□□ 1.06
TIMP1P01033 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TIMP1P01033 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TIMP1P01033 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
TIMP1P01033 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TIMP1P01033 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TIMP1P01033 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TIMP1P01033 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.69■■□□□ 1.06
TIMP1P01033 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.69■■□□□ 1.06
TIMP1P01033 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TIMP1P01033 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.69■■□□□ 1.06
TIMP1P01033 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
TIMP1P01033 YBX1P2-201ENST00000489612 999 ntBASIC21.69■■□□□ 1.06
TIMP1P01033 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.69■■□□□ 1.06
TIMP1P01033 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.69■■□□□ 1.06
TIMP1P01033 AC116562.4-202ENST00000641738 218 ntBASIC21.69■■□□□ 1.06
TIMP1P01033 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TIMP1P01033 KRT8P17-201ENST00000453110 1448 ntBASIC21.69■■□□□ 1.06
TIMP1P01033 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TIMP1P01033 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TIMP1P01033 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
TIMP1P01033 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.69■■□□□ 1.06
TIMP1P01033 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.69■■□□□ 1.06
TIMP1P01033 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.68■■□□□ 1.06
TIMP1P01033 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TIMP1P01033 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
TIMP1P01033 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.68■■□□□ 1.06
TIMP1P01033 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.68■■□□□ 1.06
TIMP1P01033 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.68■■□□□ 1.06
TIMP1P01033 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TIMP1P01033 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TIMP1P01033 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
TIMP1P01033 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TIMP1P01033 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.67■■□□□ 1.06
TIMP1P01033 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TIMP1P01033 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TIMP1P01033 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TIMP1P01033 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TIMP1P01033 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TIMP1P01033 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
TIMP1P01033 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.67■■□□□ 1.06
TIMP1P01033 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.67■■□□□ 1.06
TIMP1P01033 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TIMP1P01033 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TIMP1P01033 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
TIMP1P01033 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TIMP1P01033 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TIMP1P01033 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.66■■□□□ 1.06
TIMP1P01033 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.66■■□□□ 1.06
TIMP1P01033 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TIMP1P01033 FAM207BP-201ENST00000447172 505 ntBASIC21.66■■□□□ 1.06
TIMP1P01033 AC092647.4-201ENST00000457211 535 ntBASIC21.66■■□□□ 1.06
TIMP1P01033 COX11P1-201ENST00000489116 835 ntBASIC21.66■■□□□ 1.06
TIMP1P01033 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.66■■□□□ 1.06
TIMP1P01033 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
TIMP1P01033 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TIMP1P01033 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TIMP1P01033 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.66■■□□□ 1.06
TIMP1P01033 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TIMP1P01033 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TIMP1P01033 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.65■■□□□ 1.06
TIMP1P01033 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TIMP1P01033 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TIMP1P01033 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TIMP1P01033 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.65■■□□□ 1.06
TIMP1P01033 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
TIMP1P01033 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
TIMP1P01033 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.65■■□□□ 1.06
TIMP1P01033 YBX1P10-201ENST00000444752 975 ntBASIC21.65■■□□□ 1.06
TIMP1P01033 CCR12P-201ENST00000446203 998 ntBASIC21.65■■□□□ 1.06
TIMP1P01033 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TIMP1P01033 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
TIMP1P01033 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.65■■□□□ 1.06
TIMP1P01033 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
TIMP1P01033 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TIMP1P01033 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TIMP1P01033 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
TIMP1P01033 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
TIMP1P01033 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TIMP1P01033 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
TIMP1P01033 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
TIMP1P01033 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TIMP1P01033 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TIMP1P01033 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TIMP1P01033 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TIMP1P01033 PCED1CP-201ENST00000419887 785 ntBASIC21.64■■□□□ 1.05
TIMP1P01033 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms