Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MT-CO1P00395 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-CO1P00395 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-CO1P00395 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
MT-CO1P00395 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.42■□□□□ 0.86
MT-CO1P00395 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
MT-CO1P00395 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MT-CO1P00395 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
MT-CO1P00395 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.42■□□□□ 0.86
MT-CO1P00395 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-CO1P00395 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.42■□□□□ 0.86
MT-CO1P00395 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.42■□□□□ 0.86
MT-CO1P00395 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MT-CO1P00395 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
MT-CO1P00395 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MT-CO1P00395 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.42■□□□□ 0.86
MT-CO1P00395 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-CO1P00395 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MT-CO1P00395 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
MT-CO1P00395 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MT-CO1P00395 LINC01521-201ENST00000504184 1943 ntBASIC20.41■□□□□ 0.86
MT-CO1P00395 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.41■□□□□ 0.86
MT-CO1P00395 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-CO1P00395 SMG8-203ENST00000578922 2178 ntBASIC20.41■□□□□ 0.86
MT-CO1P00395 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-CO1P00395 AC073314.1-201ENST00000568729 2216 ntBASIC20.41■□□□□ 0.86
MT-CO1P00395 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MT-CO1P00395 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-CO1P00395 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MT-CO1P00395 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
MT-CO1P00395 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-CO1P00395 RPS2P52-201ENST00000469610 820 ntBASIC20.41■□□□□ 0.86
MT-CO1P00395 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MT-CO1P00395 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.41■□□□□ 0.86
MT-CO1P00395 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.41■□□□□ 0.86
MT-CO1P00395 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.41■□□□□ 0.86
MT-CO1P00395 AC069544.1-201ENST00000609399 999 ntBASIC20.41■□□□□ 0.86
MT-CO1P00395 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.41■□□□□ 0.86
MT-CO1P00395 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.41■□□□□ 0.86
MT-CO1P00395 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-CO1P00395 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MT-CO1P00395 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.41■□□□□ 0.86
MT-CO1P00395 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MT-CO1P00395 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MT-CO1P00395 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-CO1P00395 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-CO1P00395 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MT-CO1P00395 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
MT-CO1P00395 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-CO1P00395 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-CO1P00395 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
MT-CO1P00395 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.4■□□□□ 0.86
MT-CO1P00395 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.4■□□□□ 0.86
MT-CO1P00395 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
MT-CO1P00395 GCSHP5-201ENST00000443090 522 ntBASIC20.4■□□□□ 0.86
MT-CO1P00395 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.4■□□□□ 0.86
MT-CO1P00395 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.4■□□□□ 0.86
MT-CO1P00395 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-CO1P00395 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-CO1P00395 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.4■□□□□ 0.86
MT-CO1P00395 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MT-CO1P00395 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-CO1P00395 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MT-CO1P00395 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MT-CO1P00395 AC124283.5-201ENST00000624661 1809 ntBASIC20.4■□□□□ 0.86
MT-CO1P00395 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MT-CO1P00395 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MT-CO1P00395 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MT-CO1P00395 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.39■□□□□ 0.85
MT-CO1P00395 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MT-CO1P00395 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.39■□□□□ 0.85
MT-CO1P00395 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MT-CO1P00395 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MT-CO1P00395 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.39■□□□□ 0.85
MT-CO1P00395 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.39■□□□□ 0.85
MT-CO1P00395 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MT-CO1P00395 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.39■□□□□ 0.85
MT-CO1P00395 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
MT-CO1P00395 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-CO1P00395 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-CO1P00395 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-CO1P00395 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-CO1P00395 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-CO1P00395 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
MT-CO1P00395 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
MT-CO1P00395 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MT-CO1P00395 FEM1AP1-201ENST00000431297 1995 ntBASIC20.38■□□□□ 0.85
MT-CO1P00395 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.38■□□□□ 0.85
MT-CO1P00395 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
MT-CO1P00395 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
MT-CO1P00395 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-CO1P00395 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MT-CO1P00395 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
MT-CO1P00395 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.38■□□□□ 0.85
MT-CO1P00395 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
MT-CO1P00395 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MT-CO1P00395 AC142381.4-202ENST00000563973 229 ntBASIC20.38■□□□□ 0.85
MT-CO1P00395 RN7SL471P-201ENST00000580476 299 ntBASIC20.38■□□□□ 0.85
MT-CO1P00395 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
MT-CO1P00395 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms