Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.4■□□□□ 0.86
TOP3BO95985 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.4■□□□□ 0.86
TOP3BO95985 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.4■□□□□ 0.86
TOP3BO95985 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.4■□□□□ 0.86
TOP3BO95985 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TOP3BO95985 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.4■□□□□ 0.86
TOP3BO95985 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.4■□□□□ 0.86
TOP3BO95985 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.4■□□□□ 0.86
TOP3BO95985 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TOP3BO95985 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.4■□□□□ 0.86
TOP3BO95985 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TOP3BO95985 CYP2T3P-201ENST00000601990 817 ntBASIC20.4■□□□□ 0.86
TOP3BO95985 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
TOP3BO95985 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TOP3BO95985 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.39■□□□□ 0.86
TOP3BO95985 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TOP3BO95985 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.39■□□□□ 0.86
TOP3BO95985 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
TOP3BO95985 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP3BO95985 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TOP3BO95985 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP3BO95985 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.39■□□□□ 0.85
TOP3BO95985 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TOP3BO95985 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TOP3BO95985 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP3BO95985 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP3BO95985 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP3BO95985 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TOP3BO95985 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TOP3BO95985 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.39■□□□□ 0.85
TOP3BO95985 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TOP3BO95985 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.39■□□□□ 0.85
TOP3BO95985 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TOP3BO95985 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.39■□□□□ 0.85
TOP3BO95985 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP3BO95985 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP3BO95985 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP3BO95985 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP3BO95985 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TOP3BO95985 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP3BO95985 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TOP3BO95985 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TOP3BO95985 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TOP3BO95985 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.38■□□□□ 0.85
TOP3BO95985 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.38■□□□□ 0.85
TOP3BO95985 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.38■□□□□ 0.85
TOP3BO95985 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.38■□□□□ 0.85
TOP3BO95985 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP3BO95985 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TOP3BO95985 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP3BO95985 BX088651.1-201ENST00000540551 451 ntBASIC20.38■□□□□ 0.85
TOP3BO95985 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.38■□□□□ 0.85
TOP3BO95985 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.38■□□□□ 0.85
TOP3BO95985 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TOP3BO95985 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP3BO95985 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP3BO95985 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.38■□□□□ 0.85
TOP3BO95985 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP3BO95985 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TOP3BO95985 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.38■□□□□ 0.85
TOP3BO95985 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
TOP3BO95985 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.37■□□□□ 0.85
TOP3BO95985 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TOP3BO95985 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.37■□□□□ 0.85
TOP3BO95985 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.37■□□□□ 0.85
TOP3BO95985 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
TOP3BO95985 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.37■□□□□ 0.85
TOP3BO95985 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TOP3BO95985 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TOP3BO95985 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP3BO95985 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.37■□□□□ 0.85
TOP3BO95985 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.37■□□□□ 0.85
TOP3BO95985 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.37■□□□□ 0.85
TOP3BO95985 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.36■□□□□ 0.85
TOP3BO95985 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TOP3BO95985 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TOP3BO95985 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.36■□□□□ 0.85
TOP3BO95985 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms