Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC073195.1-201ENST00000607241 877 ntBASIC16.71■□□□□ 0.27
ABCA1O95477 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.71■□□□□ 0.27
ABCA1O95477 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
ABCA1O95477 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.71■□□□□ 0.27
ABCA1O95477 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
ABCA1O95477 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
ABCA1O95477 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.7■□□□□ 0.26
ABCA1O95477 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.7■□□□□ 0.26
ABCA1O95477 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ABCA1O95477 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
ABCA1O95477 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ABCA1O95477 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ABCA1O95477 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ABCA1O95477 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ABCA1O95477 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ABCA1O95477 AL355355.2-201ENST00000442321 338 ntBASIC16.7■□□□□ 0.26
ABCA1O95477 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.7■□□□□ 0.26
ABCA1O95477 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.7■□□□□ 0.26
ABCA1O95477 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.7■□□□□ 0.26
ABCA1O95477 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ABCA1O95477 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ABCA1O95477 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.7■□□□□ 0.26
ABCA1O95477 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ABCA1O95477 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ABCA1O95477 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ABCA1O95477 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ABCA1O95477 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.7■□□□□ 0.26
ABCA1O95477 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.7■□□□□ 0.26
ABCA1O95477 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
ABCA1O95477 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.7■□□□□ 0.26
ABCA1O95477 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.7■□□□□ 0.26
ABCA1O95477 NTF6B-201ENST00000591913 560 ntBASIC16.7■□□□□ 0.26
ABCA1O95477 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.7■□□□□ 0.26
ABCA1O95477 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ABCA1O95477 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ABCA1O95477 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ABCA1O95477 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.69■□□□□ 0.26
ABCA1O95477 Z98882.1-201ENST00000622160 2253 ntBASIC16.69■□□□□ 0.26
ABCA1O95477 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ABCA1O95477 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ABCA1O95477 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ABCA1O95477 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.69■□□□□ 0.26
ABCA1O95477 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ABCA1O95477 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ABCA1O95477 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ABCA1O95477 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ABCA1O95477 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ABCA1O95477 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ABCA1O95477 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
ABCA1O95477 AC005521.1-201ENST00000393351 872 ntBASIC16.68■□□□□ 0.26
ABCA1O95477 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.68■□□□□ 0.26
ABCA1O95477 KRT16P5-201ENST00000455284 522 ntBASIC16.68■□□□□ 0.26
ABCA1O95477 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.68■□□□□ 0.26
ABCA1O95477 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ABCA1O95477 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ABCA1O95477 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ABCA1O95477 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ABCA1O95477 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ABCA1O95477 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ABCA1O95477 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ABCA1O95477 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ABCA1O95477 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ABCA1O95477 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ABCA1O95477 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.68■□□□□ 0.26
ABCA1O95477 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
ABCA1O95477 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.68■□□□□ 0.26
ABCA1O95477 AL390955.1-201ENST00000428694 934 ntBASIC16.68■□□□□ 0.26
ABCA1O95477 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.68■□□□□ 0.26
ABCA1O95477 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
ABCA1O95477 AL031963.3-201ENST00000606441 850 ntBASIC16.68■□□□□ 0.26
ABCA1O95477 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ABCA1O95477 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ABCA1O95477 PCDHAC2-203ENST00000615316 3011 ntBASIC16.68■□□□□ 0.26
ABCA1O95477 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ABCA1O95477 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.68■□□□□ 0.26
ABCA1O95477 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.67■□□□□ 0.26
ABCA1O95477 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ABCA1O95477 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.67■□□□□ 0.26
ABCA1O95477 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ABCA1O95477 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.67■□□□□ 0.26
ABCA1O95477 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.67■□□□□ 0.26
ABCA1O95477 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ABCA1O95477 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.67■□□□□ 0.26
ABCA1O95477 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ABCA1O95477 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.67■□□□□ 0.26
ABCA1O95477 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.67■□□□□ 0.26
ABCA1O95477 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ABCA1O95477 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ABCA1O95477 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ABCA1O95477 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
ABCA1O95477 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
ABCA1O95477 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ABCA1O95477 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ABCA1O95477 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ABCA1O95477 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ABCA1O95477 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ABCA1O95477 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ABCA1O95477 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ABCA1O95477 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
ABCA1O95477 REXO1L10P-201ENST00000615707 1290 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms