Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MBD4O95243 LINC01006-201ENST00000333319 2292 ntBASIC23.84■■□□□ 1.41
MBD4O95243 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.84■■□□□ 1.41
MBD4O95243 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.84■■□□□ 1.41
MBD4O95243 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.84■■□□□ 1.41
MBD4O95243 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
MBD4O95243 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.84■■□□□ 1.41
MBD4O95243 AC093827.2-201ENST00000512654 315 ntBASIC23.84■■□□□ 1.41
MBD4O95243 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.84■■□□□ 1.41
MBD4O95243 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.84■■□□□ 1.41
MBD4O95243 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.84■■□□□ 1.41
MBD4O95243 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MBD4O95243 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
MBD4O95243 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
MBD4O95243 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
MBD4O95243 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MBD4O95243 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
MBD4O95243 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
MBD4O95243 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC23.83■■□□□ 1.41
MBD4O95243 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC23.83■■□□□ 1.41
MBD4O95243 AL162377.1-201ENST00000618844 1793 ntBASIC23.83■■□□□ 1.41
MBD4O95243 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
MBD4O95243 AL391422.3-201ENST00000603791 2761 ntBASIC23.83■■□□□ 1.41
MBD4O95243 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.83■■□□□ 1.41
MBD4O95243 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
MBD4O95243 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
MBD4O95243 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
MBD4O95243 CALM3-202ENST00000391918 702 ntTSL 2 BASIC23.83■■□□□ 1.41
MBD4O95243 AC133681.1-201ENST00000465482 601 ntBASIC23.83■■□□□ 1.41
MBD4O95243 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.83■■□□□ 1.41
MBD4O95243 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.83■■□□□ 1.41
MBD4O95243 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
MBD4O95243 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
MBD4O95243 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD4O95243 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC23.82■■□□□ 1.4
MBD4O95243 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.82■■□□□ 1.4
MBD4O95243 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD4O95243 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MBD4O95243 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
MBD4O95243 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD4O95243 PRKY-204ENST00000533551 1019 ntBASIC23.82■■□□□ 1.4
MBD4O95243 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.82■■□□□ 1.4
MBD4O95243 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD4O95243 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD4O95243 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.82■■□□□ 1.4
MBD4O95243 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
MBD4O95243 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23.82■■□□□ 1.4
MBD4O95243 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MBD4O95243 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
MBD4O95243 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.81■■□□□ 1.4
MBD4O95243 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.81■■□□□ 1.4
MBD4O95243 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
MBD4O95243 UBE2SP1-201ENST00000450587 669 ntBASIC23.81■■□□□ 1.4
MBD4O95243 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.81■■□□□ 1.4
MBD4O95243 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.81■■□□□ 1.4
MBD4O95243 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.81■■□□□ 1.4
MBD4O95243 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.81■■□□□ 1.4
MBD4O95243 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
MBD4O95243 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC23.81■■□□□ 1.4
MBD4O95243 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MBD4O95243 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MBD4O95243 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC23.81■■□□□ 1.4
MBD4O95243 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MBD4O95243 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MBD4O95243 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
MBD4O95243 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MBD4O95243 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MBD4O95243 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MBD4O95243 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.8■■□□□ 1.4
MBD4O95243 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MBD4O95243 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MBD4O95243 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MBD4O95243 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
MBD4O95243 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
MBD4O95243 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.8■■□□□ 1.4
MBD4O95243 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
MBD4O95243 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
MBD4O95243 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.8■■□□□ 1.4
MBD4O95243 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
MBD4O95243 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.8■■□□□ 1.4
MBD4O95243 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.8■■□□□ 1.4
MBD4O95243 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.8■■□□□ 1.4
MBD4O95243 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.8■■□□□ 1.4
MBD4O95243 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MBD4O95243 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.8■■□□□ 1.4
MBD4O95243 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MBD4O95243 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.8■■□□□ 1.4
MBD4O95243 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MBD4O95243 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.8■■□□□ 1.4
MBD4O95243 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
MBD4O95243 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
MBD4O95243 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
MBD4O95243 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
MBD4O95243 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.79■■□□□ 1.4
MBD4O95243 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
MBD4O95243 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
MBD4O95243 AC110285.5-201ENST00000611501 352 ntBASIC23.79■■□□□ 1.4
MBD4O95243 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.79■■□□□ 1.4
MBD4O95243 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
MBD4O95243 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms