Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BEST1O76090 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BEST1O76090 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.98■□□□□ 0.95
BEST1O76090 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.98■□□□□ 0.95
BEST1O76090 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
BEST1O76090 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.98■□□□□ 0.95
BEST1O76090 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
BEST1O76090 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
BEST1O76090 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.98■□□□□ 0.95
BEST1O76090 AL121829.2-201ENST00000620908 328 ntBASIC20.98■□□□□ 0.95
BEST1O76090 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
BEST1O76090 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.98■□□□□ 0.95
BEST1O76090 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BEST1O76090 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
BEST1O76090 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
BEST1O76090 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BEST1O76090 AC099778.1-201ENST00000568593 1911 ntBASIC20.98■□□□□ 0.95
BEST1O76090 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
BEST1O76090 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.97■□□□□ 0.95
BEST1O76090 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
BEST1O76090 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
BEST1O76090 KRT16P6-202ENST00000425692 1426 ntBASIC20.97■□□□□ 0.95
BEST1O76090 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BEST1O76090 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BEST1O76090 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BEST1O76090 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.97■□□□□ 0.95
BEST1O76090 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BEST1O76090 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
BEST1O76090 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.97■□□□□ 0.95
BEST1O76090 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.97■□□□□ 0.95
BEST1O76090 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.97■□□□□ 0.95
BEST1O76090 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.97■□□□□ 0.95
BEST1O76090 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.97■□□□□ 0.95
BEST1O76090 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.97■□□□□ 0.95
BEST1O76090 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.97■□□□□ 0.95
BEST1O76090 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BEST1O76090 AC066615.1-201ENST00000640911 628 ntBASIC20.97■□□□□ 0.95
BEST1O76090 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BEST1O76090 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.97■□□□□ 0.95
BEST1O76090 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BEST1O76090 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BEST1O76090 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
BEST1O76090 AL691432.2-201ENST00000607222 2038 ntBASIC20.97■□□□□ 0.95
BEST1O76090 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BEST1O76090 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BEST1O76090 AC112907.3-201ENST00000577781 2400 ntBASIC20.96■□□□□ 0.95
BEST1O76090 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BEST1O76090 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BEST1O76090 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
BEST1O76090 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.96■□□□□ 0.95
BEST1O76090 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BEST1O76090 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
BEST1O76090 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BEST1O76090 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
BEST1O76090 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BEST1O76090 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
BEST1O76090 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BEST1O76090 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.96■□□□□ 0.95
BEST1O76090 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
BEST1O76090 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
BEST1O76090 AC124016.1-201ENST00000609552 612 ntBASIC20.96■□□□□ 0.95
BEST1O76090 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.96■□□□□ 0.95
BEST1O76090 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.96■□□□□ 0.95
BEST1O76090 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
BEST1O76090 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
BEST1O76090 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
BEST1O76090 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
BEST1O76090 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.95■□□□□ 0.94
BEST1O76090 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST1O76090 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST1O76090 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
BEST1O76090 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST1O76090 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BEST1O76090 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST1O76090 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST1O76090 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST1O76090 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.95■□□□□ 0.94
BEST1O76090 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.95■□□□□ 0.94
BEST1O76090 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.95■□□□□ 0.94
BEST1O76090 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.95■□□□□ 0.94
BEST1O76090 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
BEST1O76090 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.95■□□□□ 0.94
BEST1O76090 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.95■□□□□ 0.94
BEST1O76090 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.95■□□□□ 0.94
BEST1O76090 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.95■□□□□ 0.94
BEST1O76090 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BEST1O76090 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BEST1O76090 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BEST1O76090 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
BEST1O76090 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.94■□□□□ 0.94
BEST1O76090 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.94■□□□□ 0.94
BEST1O76090 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.94■□□□□ 0.94
BEST1O76090 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BEST1O76090 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.94■□□□□ 0.94
BEST1O76090 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms