Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNCGO76070 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC13.45□□□□□ -0.26
SNCGO76070 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNCGO76070 AL139384.1-201ENST00000612143 3047 ntBASIC13.45□□□□□ -0.26
SNCGO76070 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC13.44□□□□□ -0.26
SNCGO76070 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 AC012313.1-201ENST00000593393 3059 ntBASIC13.44□□□□□ -0.26
SNCGO76070 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.44□□□□□ -0.26
SNCGO76070 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC13.44□□□□□ -0.26
SNCGO76070 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC13.44□□□□□ -0.26
SNCGO76070 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
SNCGO76070 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC13.44□□□□□ -0.26
SNCGO76070 DUX4L4-201ENST00000566884 1269 ntBASIC13.44□□□□□ -0.26
SNCGO76070 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC13.44□□□□□ -0.26
SNCGO76070 AC016575.1-201ENST00000607026 382 ntBASIC13.44□□□□□ -0.26
SNCGO76070 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC13.44□□□□□ -0.26
SNCGO76070 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SNCGO76070 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
SNCGO76070 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SNCGO76070 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC13.44□□□□□ -0.26
SNCGO76070 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
SNCGO76070 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.44□□□□□ -0.26
SNCGO76070 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC13.44□□□□□ -0.26
SNCGO76070 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
SNCGO76070 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
SNCGO76070 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
SNCGO76070 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
SNCGO76070 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SNCGO76070 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SNCGO76070 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 AC079598.2-202ENST00000546624 1451 ntBASIC13.43□□□□□ -0.26
SNCGO76070 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC13.43□□□□□ -0.26
SNCGO76070 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.43□□□□□ -0.26
SNCGO76070 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SNCGO76070 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
SNCGO76070 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC13.43□□□□□ -0.26
SNCGO76070 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 LONRF2P2-201ENST00000439212 571 ntBASIC13.43□□□□□ -0.26
SNCGO76070 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SNCGO76070 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
SNCGO76070 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 AC006128.1-201ENST00000624704 1661 ntBASIC13.43□□□□□ -0.26
SNCGO76070 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
SNCGO76070 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.43□□□□□ -0.26
SNCGO76070 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.43□□□□□ -0.26
SNCGO76070 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.43□□□□□ -0.26
SNCGO76070 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SNCGO76070 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.42□□□□□ -0.26
SNCGO76070 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCGO76070 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SNCGO76070 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.42□□□□□ -0.26
SNCGO76070 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCGO76070 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SNCGO76070 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCGO76070 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCGO76070 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCGO76070 DYM-203ENST00000442713 2147 ntTSL 2 BASIC13.42□□□□□ -0.26
SNCGO76070 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SNCGO76070 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCGO76070 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCGO76070 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC13.42□□□□□ -0.26
SNCGO76070 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCGO76070 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCGO76070 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SNCGO76070 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
SNCGO76070 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCGO76070 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.42□□□□□ -0.26
SNCGO76070 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCGO76070 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.42□□□□□ -0.26
SNCGO76070 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SNCGO76070 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms