Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM13O60858 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM13O60858 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM13O60858 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM13O60858 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRIM13O60858 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM13O60858 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM13O60858 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM13O60858 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM13O60858 Z82202.1-201ENST00000623446 1880 ntBASIC19.6■□□□□ 0.73
TRIM13O60858 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM13O60858 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM13O60858 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM13O60858 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM13O60858 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM13O60858 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM13O60858 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM13O60858 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM13O60858 AL591742.1-201ENST00000604433 565 ntBASIC19.6■□□□□ 0.73
TRIM13O60858 MYCNOS-205ENST00000641950 531 ntBASIC19.6■□□□□ 0.73
TRIM13O60858 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TRIM13O60858 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM13O60858 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM13O60858 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRIM13O60858 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM13O60858 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM13O60858 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM13O60858 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM13O60858 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM13O60858 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM13O60858 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM13O60858 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM13O60858 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM13O60858 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM13O60858 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM13O60858 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM13O60858 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM13O60858 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM13O60858 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM13O60858 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM13O60858 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.59■□□□□ 0.73
TRIM13O60858 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM13O60858 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM13O60858 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRIM13O60858 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM13O60858 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM13O60858 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM13O60858 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM13O60858 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM13O60858 PTBP1P-201ENST00000554374 1601 ntBASIC19.58■□□□□ 0.73
TRIM13O60858 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.58■□□□□ 0.73
TRIM13O60858 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.58■□□□□ 0.73
TRIM13O60858 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
TRIM13O60858 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM13O60858 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TRIM13O60858 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM13O60858 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.58■□□□□ 0.72
TRIM13O60858 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM13O60858 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM13O60858 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM13O60858 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TRIM13O60858 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM13O60858 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRIM13O60858 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM13O60858 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM13O60858 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM13O60858 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM13O60858 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM13O60858 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM13O60858 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM13O60858 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM13O60858 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.57■□□□□ 0.72
TRIM13O60858 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM13O60858 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM13O60858 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM13O60858 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM13O60858 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.57■□□□□ 0.72
TRIM13O60858 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM13O60858 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM13O60858 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.57■□□□□ 0.72
TRIM13O60858 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM13O60858 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM13O60858 KRT8P17-201ENST00000453110 1448 ntBASIC19.57■□□□□ 0.72
TRIM13O60858 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
TRIM13O60858 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM13O60858 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM13O60858 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRIM13O60858 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.56■□□□□ 0.72
TRIM13O60858 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM13O60858 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.56■□□□□ 0.72
TRIM13O60858 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM13O60858 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
TRIM13O60858 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM13O60858 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.56■□□□□ 0.72
TRIM13O60858 TERF1P5-201ENST00000477545 1207 ntBASIC19.56■□□□□ 0.72
TRIM13O60858 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRIM13O60858 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRIM13O60858 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TRIM13O60858 KRT18P61-201ENST00000585825 1298 ntBASIC19.56■□□□□ 0.72
TRIM13O60858 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms