Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.1■□□□□ 0.65
LCMT2O60294 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.1■□□□□ 0.65
LCMT2O60294 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LCMT2O60294 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LCMT2O60294 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.1■□□□□ 0.65
LCMT2O60294 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
LCMT2O60294 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.09■□□□□ 0.65
LCMT2O60294 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LCMT2O60294 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LCMT2O60294 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
LCMT2O60294 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LCMT2O60294 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
LCMT2O60294 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LCMT2O60294 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LCMT2O60294 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LCMT2O60294 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.09■□□□□ 0.65
LCMT2O60294 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.09■□□□□ 0.65
LCMT2O60294 CD99P1-205ENST00000527459 561 ntBASIC19.09■□□□□ 0.65
LCMT2O60294 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.09■□□□□ 0.65
LCMT2O60294 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LCMT2O60294 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.09■□□□□ 0.65
LCMT2O60294 SOX15-203ENST00000570788 1093 ntBASIC19.09■□□□□ 0.65
LCMT2O60294 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.09■□□□□ 0.65
LCMT2O60294 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LCMT2O60294 TCF3P1-201ENST00000423021 1937 ntBASIC19.09■□□□□ 0.65
LCMT2O60294 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LCMT2O60294 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LCMT2O60294 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LCMT2O60294 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.09■□□□□ 0.65
LCMT2O60294 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LCMT2O60294 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LCMT2O60294 KRT16P6-202ENST00000425692 1426 ntBASIC19.08■□□□□ 0.65
LCMT2O60294 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.08■□□□□ 0.65
LCMT2O60294 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.08■□□□□ 0.65
LCMT2O60294 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LCMT2O60294 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LCMT2O60294 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LCMT2O60294 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LCMT2O60294 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LCMT2O60294 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
LCMT2O60294 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.08■□□□□ 0.64
LCMT2O60294 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LCMT2O60294 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
LCMT2O60294 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.08■□□□□ 0.64
LCMT2O60294 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LCMT2O60294 UNC93B4-201ENST00000505679 747 ntBASIC19.08■□□□□ 0.64
LCMT2O60294 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.08■□□□□ 0.64
LCMT2O60294 AC008403.3-201ENST00000598924 454 ntBASIC19.08■□□□□ 0.64
LCMT2O60294 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LCMT2O60294 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LCMT2O60294 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LCMT2O60294 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
LCMT2O60294 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LCMT2O60294 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LCMT2O60294 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LCMT2O60294 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LCMT2O60294 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.07■□□□□ 0.64
LCMT2O60294 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.07■□□□□ 0.64
LCMT2O60294 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LCMT2O60294 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.07■□□□□ 0.64
LCMT2O60294 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LCMT2O60294 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.07■□□□□ 0.64
LCMT2O60294 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
LCMT2O60294 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.07■□□□□ 0.64
LCMT2O60294 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 MIR4651-201ENST00000582622 73 ntBASIC19.07■□□□□ 0.64
LCMT2O60294 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.07■□□□□ 0.64
LCMT2O60294 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.07■□□□□ 0.64
LCMT2O60294 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
LCMT2O60294 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.07■□□□□ 0.64
LCMT2O60294 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LCMT2O60294 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LCMT2O60294 AC124283.5-201ENST00000624661 1809 ntBASIC19.07■□□□□ 0.64
LCMT2O60294 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.06■□□□□ 0.64
LCMT2O60294 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.06■□□□□ 0.64
LCMT2O60294 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LCMT2O60294 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LCMT2O60294 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LCMT2O60294 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LCMT2O60294 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.06■□□□□ 0.64
LCMT2O60294 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
LCMT2O60294 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.06■□□□□ 0.64
LCMT2O60294 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LCMT2O60294 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
LCMT2O60294 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LCMT2O60294 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms